RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
RPN1-201ENST00000296255 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
RPN1-201ENST00000296255 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
RPN1-201ENST00000296255 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
RPN1-201ENST00000296255 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
RPN1-201ENST00000296255 MT1GP13640 62 aa5.39□□□□□ -1.55
RPN1-201ENST00000296255 MT1MQ8N339 61 aa5.38□□□□□ -1.55
RPN1-201ENST00000296255 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
RPN1-201ENST00000296255 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
RPN1-201ENST00000296255 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
RPN1-201ENST00000296255 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
RPN1-201ENST00000296255 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
RPN1-201ENST00000296255 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
RPN1-201ENST00000296255 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
RPN1-201ENST00000296255 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
RPN1-201ENST00000296255 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
RPN1-201ENST00000296255 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
RPN1-201ENST00000296255 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
RPN1-201ENST00000296255 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.93□□□□□ -1.62
RPN1-201ENST00000296255 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
RPN1-201ENST00000296255 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
RPN1-201ENST00000296255 MT1AP04731 61 aa4.84□□□□□ -1.64
RPN1-201ENST00000296255 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
RPN1-201ENST00000296255 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
RPN1-201ENST00000296255 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
RPN1-201ENST00000296255 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
RPN1-201ENST00000296255 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
RPN1-201ENST00000296255 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
RPN1-201ENST00000296255 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
RPN1-201ENST00000296255 SPRR2EP22531 72 aa4.68□□□□□ -1.66
RPN1-201ENST00000296255 SPRR2BP35325 72 aa4.68□□□□□ -1.66
RPN1-201ENST00000296255 SPRR2AP35326 72 aa4.68□□□□□ -1.66
RPN1-201ENST00000296255 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
RPN1-201ENST00000296255 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
RPN1-201ENST00000296255 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
RPN1-201ENST00000296255 SPRR2DP22532 72 aa4.49□□□□□ -1.69
RPN1-201ENST00000296255 PRM1P04553 51 aa4.46□□□□□ -1.7
RPN1-201ENST00000296255 NEBP20929 6669 aa4.45□□□□□ -1.7
RPN1-201ENST00000296255 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
RPN1-201ENST00000296255 MT3P25713 68 aa4.32□□□□□ -1.72
RPN1-201ENST00000296255 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
RPN1-201ENST00000296255 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
RPN1-201ENST00000296255 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
RPN1-201ENST00000296255 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
RPN1-201ENST00000296255 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
RPN1-201ENST00000296255 MT4P47944 62 aa3.97□□□□□ -1.77
RPN1-201ENST00000296255 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.78
RPN1-201ENST00000296255 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
RPN1-201ENST00000296255 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
RPN1-201ENST00000296255 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
RPN1-201ENST00000296255 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
RPN1-201ENST00000296255 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
RPN1-201ENST00000296255 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
RPN1-201ENST00000296255 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
RPN1-201ENST00000296255 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
RPN1-201ENST00000296255 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
RPN1-201ENST00000296255 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
RPN1-201ENST00000296255 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
RPN1-201ENST00000296255 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
RPN1-201ENST00000296255 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
RPN1-201ENST00000296255 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
RPN1-201ENST00000296255 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
RPN1-201ENST00000296255 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
RPN1-201ENST00000296255 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
RPN1-201ENST00000296255 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
RPN1-201ENST00000296255 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
RPN1-201ENST00000296255 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
RPN1-201ENST00000296255 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
RPN1-201ENST00000296255 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
RPN1-201ENST00000296255 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
RPN1-201ENST00000296255 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
RPN1-201ENST00000296255 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
RPN1-201ENST00000296255 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
RPN1-201ENST00000296255 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
RPN1-201ENST00000296255 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
RPN1-201ENST00000296255 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
RPN1-201ENST00000296255 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 115.7 ms