RNA–Protein interactions for RNA: ENST00000295925.5

CCNL1-201, Transcript of cyclin L1, humanhuman

TSL 1 (best) BASIC

Gene CCNL1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-201ENST00000295925 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
CCNL1-201ENST00000295925 MT1EP04732 61 aa6.07□□□□□ -1.44
CCNL1-201ENST00000295925 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
CCNL1-201ENST00000295925 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
CCNL1-201ENST00000295925 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
CCNL1-201ENST00000295925 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
CCNL1-201ENST00000295925 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
CCNL1-201ENST00000295925 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
CCNL1-201ENST00000295925 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CCNL1-201ENST00000295925 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
CCNL1-201ENST00000295925 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
CCNL1-201ENST00000295925 MT1LQ93083 61 aa5.85□□□□□ -1.47
CCNL1-201ENST00000295925 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
CCNL1-201ENST00000295925 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
CCNL1-201ENST00000295925 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
CCNL1-201ENST00000295925 MT1GP13640 62 aa5.82□□□□□ -1.48
CCNL1-201ENST00000295925 ROMO1P60602 79 aa5.8□□□□□ -1.48
CCNL1-201ENST00000295925 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
CCNL1-201ENST00000295925 MT1MQ8N339 61 aa5.77□□□□□ -1.49
CCNL1-201ENST00000295925 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
CCNL1-201ENST00000295925 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
CCNL1-201ENST00000295925 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
CCNL1-201ENST00000295925 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
CCNL1-201ENST00000295925 DSTQ03001 7570 aaKnown RBP5.61□□□□□ -1.51
CCNL1-201ENST00000295925 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
CCNL1-201ENST00000295925 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CCNL1-201ENST00000295925 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
CCNL1-201ENST00000295925 H3BS24 57 aa5.38□□□□□ -1.55
CCNL1-201ENST00000295925 MT4P47944 62 aa5.32□□□□□ -1.56
CCNL1-201ENST00000295925 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
CCNL1-201ENST00000295925 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CCNL1-201ENST00000295925 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
CCNL1-201ENST00000295925 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-201ENST00000295925 GPR98Q8WXG9 6306 aa5.23□□□□□ -1.57
CCNL1-201ENST00000295925 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
CCNL1-201ENST00000295925 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
CCNL1-201ENST00000295925 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
CCNL1-201ENST00000295925 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
CCNL1-201ENST00000295925 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
CCNL1-201ENST00000295925 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
CCNL1-201ENST00000295925 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
CCNL1-201ENST00000295925 MT1AP04731 61 aa4.98□□□□□ -1.61
CCNL1-201ENST00000295925 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
CCNL1-201ENST00000295925 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CCNL1-201ENST00000295925 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
CCNL1-201ENST00000295925 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
CCNL1-201ENST00000295925 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
CCNL1-201ENST00000295925 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
CCNL1-201ENST00000295925 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
CCNL1-201ENST00000295925 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
CCNL1-201ENST00000295925 MT3P25713 68 aa4.52□□□□□ -1.69
CCNL1-201ENST00000295925 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
CCNL1-201ENST00000295925 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
CCNL1-201ENST00000295925 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
CCNL1-201ENST00000295925 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
CCNL1-201ENST00000295925 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CCNL1-201ENST00000295925 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
CCNL1-201ENST00000295925 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CCNL1-201ENST00000295925 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
CCNL1-201ENST00000295925 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-201ENST00000295925 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
CCNL1-201ENST00000295925 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
CCNL1-201ENST00000295925 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
CCNL1-201ENST00000295925 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
CCNL1-201ENST00000295925 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
CCNL1-201ENST00000295925 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
CCNL1-201ENST00000295925 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
CCNL1-201ENST00000295925 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
CCNL1-201ENST00000295925 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CCNL1-201ENST00000295925 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
CCNL1-201ENST00000295925 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
CCNL1-201ENST00000295925 PRM1P04553 51 aa3.01□□□□□ -1.93
CCNL1-201ENST00000295925 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
CCNL1-201ENST00000295925 INE1O15225 51 aa2.91□□□□□ -1.94
CCNL1-201ENST00000295925 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
CCNL1-201ENST00000295925 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CCNL1-201ENST00000295925 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms