RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
CNOT9-202ENST00000295701 SPTSSBQ8NFR3 76 aa3.37□□□□□ -1.87
CNOT9-202ENST00000295701 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
CNOT9-202ENST00000295701 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
CNOT9-202ENST00000295701 MT1GP13640 62 aa3.34□□□□□ -1.87
CNOT9-202ENST00000295701 A0A0D9SG42 100 aa3.33□□□□□ -1.88
CNOT9-202ENST00000295701 MT1MQ8N339 61 aa3.32□□□□□ -1.88
CNOT9-202ENST00000295701 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
CNOT9-202ENST00000295701 A8MU10 97 aa3.29□□□□□ -1.88
CNOT9-202ENST00000295701 A0A1B0GV90 55 aa3.28□□□□□ -1.88
CNOT9-202ENST00000295701 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
CNOT9-202ENST00000295701 MT1LQ93083 61 aa3.28□□□□□ -1.88
CNOT9-202ENST00000295701 SNURFQ9Y675 71 aa3.26□□□□□ -1.89
CNOT9-202ENST00000295701 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
CNOT9-202ENST00000295701 SPINT4Q6UDR6 99 aa3.24□□□□□ -1.89
CNOT9-202ENST00000295701 J3QR89 54 aa3.2□□□□□ -1.9
CNOT9-202ENST00000295701 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
CNOT9-202ENST00000295701 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
CNOT9-202ENST00000295701 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
CNOT9-202ENST00000295701 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
CNOT9-202ENST00000295701 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
CNOT9-202ENST00000295701 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
CNOT9-202ENST00000295701 COA5Q86WW8 74 aa3.15□□□□□ -1.91
CNOT9-202ENST00000295701 SERP1Q9Y6X1 66 aa3.15□□□□□ -1.91
CNOT9-202ENST00000295701 SEC61GP60059 68 aa3.14□□□□□ -1.91
CNOT9-202ENST00000295701 A0A1B0GU33 70 aa3.13□□□□□ -1.91
CNOT9-202ENST00000295701 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
CNOT9-202ENST00000295701 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
CNOT9-202ENST00000295701 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
CNOT9-202ENST00000295701 TNP1P09430 55 aa3.06□□□□□ -1.92
CNOT9-202ENST00000295701 SERP2Q8N6R1 65 aa3.05□□□□□ -1.92
CNOT9-202ENST00000295701 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
CNOT9-202ENST00000295701 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
CNOT9-202ENST00000295701 KRTAP12-4P60329 112 aa3□□□□□ -1.93
CNOT9-202ENST00000295701 K7ERU9 68 aa2.99□□□□□ -1.93
CNOT9-202ENST00000295701 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
CNOT9-202ENST00000295701 A0A1B0GU69 56 aa2.97□□□□□ -1.93
CNOT9-202ENST00000295701 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
CNOT9-202ENST00000295701 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CNOT9-202ENST00000295701 H7BZZ5 65 aa2.93□□□□□ -1.94
CNOT9-202ENST00000295701 COX7CP15954 63 aa2.9□□□□□ -1.95
CNOT9-202ENST00000295701 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
CNOT9-202ENST00000295701 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
CNOT9-202ENST00000295701 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
CNOT9-202ENST00000295701 MT1AP04731 61 aa2.77□□□□□ -1.97
CNOT9-202ENST00000295701 PRR15LQ9BU68 103 aa2.77□□□□□ -1.97
CNOT9-202ENST00000295701 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
CNOT9-202ENST00000295701 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
CNOT9-202ENST00000295701 LINC01558Q9Y6Z2 57 aa2.75□□□□□ -1.97
CNOT9-202ENST00000295701 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CNOT9-202ENST00000295701 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
CNOT9-202ENST00000295701 UQCR11O14957 56 aa2.7□□□□□ -1.98
CNOT9-202ENST00000295701 CCDC179H3BU77 68 aa2.68□□□□□ -1.98
CNOT9-202ENST00000295701 ANAPC13Q9BS18 74 aa2.66□□□□□ -1.98
CNOT9-202ENST00000295701 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
CNOT9-202ENST00000295701 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
CNOT9-202ENST00000295701 K7ERS5 55 aa2.57□□□□□ -2
CNOT9-202ENST00000295701 V9GYY9 64 aa2.51□□□□□ -2.01
CNOT9-202ENST00000295701 PSPHP1O15172 72 aa2.5□□□□□ -2.01
CNOT9-202ENST00000295701 TMEM258P61165 79 aa2.48□□□□□ -2.01
CNOT9-202ENST00000295701 RPS28P62857 69 aaKnown RBP2.46□□□□□ -2.02
CNOT9-202ENST00000295701 Q1T7F1 81 aa2.45□□□□□ -2.02
CNOT9-202ENST00000295701 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
CNOT9-202ENST00000295701 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CNOT9-202ENST00000295701 ROMO1P60602 79 aa2.41□□□□□ -2.02
CNOT9-202ENST00000295701 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CNOT9-202ENST00000295701 PRO0628Q9UI54 55 aa2.39□□□□□ -2.03
CNOT9-202ENST00000295701 A6NED7 52 aa2.36□□□□□ -2.03
CNOT9-202ENST00000295701 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CNOT9-202ENST00000295701 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
CNOT9-202ENST00000295701 PMAIP1Q13794 54 aa1.8□□□□□ -2.12
CNOT9-202ENST00000295701 BRK1Q8WUW1 75 aa1.75□□□□□ -2.13
CNOT9-202ENST00000295701 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
CNOT9-202ENST00000295701 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CNOT9-202ENST00000295701 INE1O15225 51 aa1.26□□□□□ -2.21
CNOT9-202ENST00000295701 PRM1P04553 51 aa1.24□□□□□ -2.21
CNOT9-202ENST00000295701 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms