RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
LRRC58-201ENST00000295628 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
LRRC58-201ENST00000295628 LRP2P98164 4655 aa4.63□□□□□ -1.67
LRRC58-201ENST00000295628 RYR1P21817 5038 aa4.62□□□□□ -1.67
LRRC58-201ENST00000295628 DNHD1Q96M86 4753 aa4.59□□□□□ -1.67
LRRC58-201ENST00000295628 MT1AP04731 61 aa4.58□□□□□ -1.68
LRRC58-201ENST00000295628 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
LRRC58-201ENST00000295628 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
LRRC58-201ENST00000295628 MUC17Q685J3 4493 aa4.46□□□□□ -1.7
LRRC58-201ENST00000295628 RYR3Q15413 4870 aa4.4□□□□□ -1.7
LRRC58-201ENST00000295628 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
LRRC58-201ENST00000295628 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
LRRC58-201ENST00000295628 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.72
LRRC58-201ENST00000295628 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
LRRC58-201ENST00000295628 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
LRRC58-201ENST00000295628 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
LRRC58-201ENST00000295628 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
LRRC58-201ENST00000295628 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
LRRC58-201ENST00000295628 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
LRRC58-201ENST00000295628 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
LRRC58-201ENST00000295628 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
LRRC58-201ENST00000295628 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
LRRC58-201ENST00000295628 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
LRRC58-201ENST00000295628 HERC2O95714 4834 aa4.04□□□□□ -1.76
LRRC58-201ENST00000295628 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
LRRC58-201ENST00000295628 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
LRRC58-201ENST00000295628 RYR2Q92736 4967 aa3.93□□□□□ -1.78
LRRC58-201ENST00000295628 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
LRRC58-201ENST00000295628 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
LRRC58-201ENST00000295628 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
LRRC58-201ENST00000295628 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
LRRC58-201ENST00000295628 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
LRRC58-201ENST00000295628 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
LRRC58-201ENST00000295628 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
LRRC58-201ENST00000295628 HERC1Q15751 4861 aa3.65□□□□□ -1.82
LRRC58-201ENST00000295628 PCLOQ9Y6V0 5065 aa3.64□□□□□ -1.83
LRRC58-201ENST00000295628 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
LRRC58-201ENST00000295628 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
LRRC58-201ENST00000295628 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.84
LRRC58-201ENST00000295628 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
LRRC58-201ENST00000295628 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
LRRC58-201ENST00000295628 MUC2Q02817 5179 aa3.42□□□□□ -1.86
LRRC58-201ENST00000295628 KMT2DO14686 5537 aa3.35□□□□□ -1.87
LRRC58-201ENST00000295628 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
LRRC58-201ENST00000295628 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
LRRC58-201ENST00000295628 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
LRRC58-201ENST00000295628 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
LRRC58-201ENST00000295628 ABCA13Q86UQ4 5058 aa3.18□□□□□ -1.9
LRRC58-201ENST00000295628 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
LRRC58-201ENST00000295628 RNF213Q63HN8 5207 aa3.12□□□□□ -1.91
LRRC58-201ENST00000295628 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
LRRC58-201ENST00000295628 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
LRRC58-201ENST00000295628 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
LRRC58-201ENST00000295628 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
LRRC58-201ENST00000295628 NEBP20929 6669 aa2.93□□□□□ -1.94
LRRC58-201ENST00000295628 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
LRRC58-201ENST00000295628 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
LRRC58-201ENST00000295628 USH2AO75445 5202 aa2.72□□□□□ -1.97
LRRC58-201ENST00000295628 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
LRRC58-201ENST00000295628 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
LRRC58-201ENST00000295628 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
LRRC58-201ENST00000295628 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
LRRC58-201ENST00000295628 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
LRRC58-201ENST00000295628 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
LRRC58-201ENST00000295628 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
LRRC58-201ENST00000295628 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
LRRC58-201ENST00000295628 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
LRRC58-201ENST00000295628 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
LRRC58-201ENST00000295628 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
LRRC58-201ENST00000295628 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
LRRC58-201ENST00000295628 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
LRRC58-201ENST00000295628 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
LRRC58-201ENST00000295628 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.09
LRRC58-201ENST00000295628 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
LRRC58-201ENST00000295628 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
LRRC58-201ENST00000295628 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
LRRC58-201ENST00000295628 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms