RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FAT4Q6V0I7 4981 aa5.78□□□□□ -1.48
CDC42EP3-201ENST00000295324 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.49
CDC42EP3-201ENST00000295324 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
CDC42EP3-201ENST00000295324 MT1MQ8N339 61 aa5.7□□□□□ -1.5
CDC42EP3-201ENST00000295324 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
CDC42EP3-201ENST00000295324 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
CDC42EP3-201ENST00000295324 MT4P47944 62 aa5.6□□□□□ -1.51
CDC42EP3-201ENST00000295324 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
CDC42EP3-201ENST00000295324 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
CDC42EP3-201ENST00000295324 MT3P25713 68 aa5.53□□□□□ -1.52
CDC42EP3-201ENST00000295324 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
CDC42EP3-201ENST00000295324 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
CDC42EP3-201ENST00000295324 MUC2Q02817 5179 aa5.42□□□□□ -1.54
CDC42EP3-201ENST00000295324 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CDC42EP3-201ENST00000295324 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
CDC42EP3-201ENST00000295324 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
CDC42EP3-201ENST00000295324 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
CDC42EP3-201ENST00000295324 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
CDC42EP3-201ENST00000295324 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CDC42EP3-201ENST00000295324 MT1AP04731 61 aa5.28□□□□□ -1.56
CDC42EP3-201ENST00000295324 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
CDC42EP3-201ENST00000295324 PRM1P04553 51 aa5.26□□□□□ -1.57
CDC42EP3-201ENST00000295324 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
CDC42EP3-201ENST00000295324 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.57
CDC42EP3-201ENST00000295324 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.57
CDC42EP3-201ENST00000295324 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
CDC42EP3-201ENST00000295324 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
CDC42EP3-201ENST00000295324 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
CDC42EP3-201ENST00000295324 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
CDC42EP3-201ENST00000295324 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
CDC42EP3-201ENST00000295324 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
CDC42EP3-201ENST00000295324 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CDC42EP3-201ENST00000295324 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
CDC42EP3-201ENST00000295324 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
CDC42EP3-201ENST00000295324 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CDC42EP3-201ENST00000295324 USH2AO75445 5202 aa4.85□□□□□ -1.63
CDC42EP3-201ENST00000295324 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
CDC42EP3-201ENST00000295324 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
CDC42EP3-201ENST00000295324 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CDC42EP3-201ENST00000295324 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
CDC42EP3-201ENST00000295324 KMT2DO14686 5537 aa4.56□□□□□ -1.68
CDC42EP3-201ENST00000295324 NEBP20929 6669 aa4.56□□□□□ -1.68
CDC42EP3-201ENST00000295324 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-201ENST00000295324 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
CDC42EP3-201ENST00000295324 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
CDC42EP3-201ENST00000295324 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
CDC42EP3-201ENST00000295324 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
CDC42EP3-201ENST00000295324 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
CDC42EP3-201ENST00000295324 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
CDC42EP3-201ENST00000295324 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
CDC42EP3-201ENST00000295324 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
CDC42EP3-201ENST00000295324 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.73
CDC42EP3-201ENST00000295324 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
CDC42EP3-201ENST00000295324 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
CDC42EP3-201ENST00000295324 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
CDC42EP3-201ENST00000295324 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
CDC42EP3-201ENST00000295324 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CDC42EP3-201ENST00000295324 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
CDC42EP3-201ENST00000295324 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CDC42EP3-201ENST00000295324 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
CDC42EP3-201ENST00000295324 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
CDC42EP3-201ENST00000295324 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
CDC42EP3-201ENST00000295324 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CDC42EP3-201ENST00000295324 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
CDC42EP3-201ENST00000295324 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
CDC42EP3-201ENST00000295324 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
CDC42EP3-201ENST00000295324 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
CDC42EP3-201ENST00000295324 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-201ENST00000295324 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
CDC42EP3-201ENST00000295324 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
CDC42EP3-201ENST00000295324 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
CDC42EP3-201ENST00000295324 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
CDC42EP3-201ENST00000295324 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
CDC42EP3-201ENST00000295324 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
CDC42EP3-201ENST00000295324 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
CDC42EP3-201ENST00000295324 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
CDC42EP3-201ENST00000295324 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms