RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
CAPN13-201ENST00000295055 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
CAPN13-201ENST00000295055 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
CAPN13-201ENST00000295055 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
CAPN13-201ENST00000295055 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
CAPN13-201ENST00000295055 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CAPN13-201ENST00000295055 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.74
CAPN13-201ENST00000295055 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
CAPN13-201ENST00000295055 MT1EP04732 61 aa4.13□□□□□ -1.75
CAPN13-201ENST00000295055 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
CAPN13-201ENST00000295055 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
CAPN13-201ENST00000295055 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
CAPN13-201ENST00000295055 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
CAPN13-201ENST00000295055 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
CAPN13-201ENST00000295055 MT1LQ93083 61 aa4.02□□□□□ -1.77
CAPN13-201ENST00000295055 MDN1Q9NU22 5596 aa4□□□□□ -1.77
CAPN13-201ENST00000295055 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
CAPN13-201ENST00000295055 SPRR2EP22531 72 aa3.96□□□□□ -1.78
CAPN13-201ENST00000295055 SPRR2BP35325 72 aa3.96□□□□□ -1.78
CAPN13-201ENST00000295055 SPRR2AP35326 72 aa3.96□□□□□ -1.78
CAPN13-201ENST00000295055 MT1GP13640 62 aa3.95□□□□□ -1.78
CAPN13-201ENST00000295055 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
CAPN13-201ENST00000295055 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
CAPN13-201ENST00000295055 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
CAPN13-201ENST00000295055 MT1MQ8N339 61 aa3.89□□□□□ -1.79
CAPN13-201ENST00000295055 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
CAPN13-201ENST00000295055 NEBP20929 6669 aa3.86□□□□□ -1.79
CAPN13-201ENST00000295055 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CAPN13-201ENST00000295055 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CAPN13-201ENST00000295055 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
CAPN13-201ENST00000295055 PRM1P04553 51 aa3.75□□□□□ -1.81
CAPN13-201ENST00000295055 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
CAPN13-201ENST00000295055 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
CAPN13-201ENST00000295055 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.82
CAPN13-201ENST00000295055 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
CAPN13-201ENST00000295055 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
CAPN13-201ENST00000295055 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
CAPN13-201ENST00000295055 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
CAPN13-201ENST00000295055 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CAPN13-201ENST00000295055 MT1AP04731 61 aa3.42□□□□□ -1.86
CAPN13-201ENST00000295055 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
CAPN13-201ENST00000295055 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
CAPN13-201ENST00000295055 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
CAPN13-201ENST00000295055 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
CAPN13-201ENST00000295055 MT4P47944 62 aa3.31□□□□□ -1.88
CAPN13-201ENST00000295055 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
CAPN13-201ENST00000295055 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CAPN13-201ENST00000295055 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CAPN13-201ENST00000295055 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
CAPN13-201ENST00000295055 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
CAPN13-201ENST00000295055 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
CAPN13-201ENST00000295055 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
CAPN13-201ENST00000295055 MT3P25713 68 aa3.1□□□□□ -1.91
CAPN13-201ENST00000295055 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
CAPN13-201ENST00000295055 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
CAPN13-201ENST00000295055 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CAPN13-201ENST00000295055 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
CAPN13-201ENST00000295055 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
CAPN13-201ENST00000295055 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
CAPN13-201ENST00000295055 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
CAPN13-201ENST00000295055 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CAPN13-201ENST00000295055 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CAPN13-201ENST00000295055 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
CAPN13-201ENST00000295055 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CAPN13-201ENST00000295055 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
CAPN13-201ENST00000295055 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CAPN13-201ENST00000295055 MUC5ACP98088 5654 aa2.58□□□□□ -2
CAPN13-201ENST00000295055 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
CAPN13-201ENST00000295055 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CAPN13-201ENST00000295055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
CAPN13-201ENST00000295055 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
CAPN13-201ENST00000295055 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
CAPN13-201ENST00000295055 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CAPN13-201ENST00000295055 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
CAPN13-201ENST00000295055 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
CAPN13-201ENST00000295055 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CAPN13-201ENST00000295055 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 1472.1 ms