RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
LSM12-201ENST00000293406 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
LSM12-201ENST00000293406 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
LSM12-201ENST00000293406 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
LSM12-201ENST00000293406 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
LSM12-201ENST00000293406 MT1GP13640 62 aa6.18□□□□□ -1.42
LSM12-201ENST00000293406 MT1MQ8N339 61 aa6.13□□□□□ -1.43
LSM12-201ENST00000293406 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
LSM12-201ENST00000293406 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
LSM12-201ENST00000293406 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
LSM12-201ENST00000293406 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
LSM12-201ENST00000293406 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
LSM12-201ENST00000293406 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
LSM12-201ENST00000293406 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
LSM12-201ENST00000293406 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
LSM12-201ENST00000293406 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
LSM12-201ENST00000293406 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
LSM12-201ENST00000293406 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.51
LSM12-201ENST00000293406 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
LSM12-201ENST00000293406 MT1AP04731 61 aa5.62□□□□□ -1.51
LSM12-201ENST00000293406 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
LSM12-201ENST00000293406 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
LSM12-201ENST00000293406 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
LSM12-201ENST00000293406 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
LSM12-201ENST00000293406 LCE3DQ9BYE3 92 aa5.48□□□□□ -1.53
LSM12-201ENST00000293406 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
LSM12-201ENST00000293406 MDN1Q9NU22 5596 aa5.4□□□□□ -1.54
LSM12-201ENST00000293406 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
LSM12-201ENST00000293406 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
LSM12-201ENST00000293406 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
LSM12-201ENST00000293406 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
LSM12-201ENST00000293406 PRM1P04553 51 aa5.25□□□□□ -1.57
LSM12-201ENST00000293406 SPRR2EP22531 72 aa5.24□□□□□ -1.57
LSM12-201ENST00000293406 SPRR2BP35325 72 aa5.24□□□□□ -1.57
LSM12-201ENST00000293406 SPRR2AP35326 72 aa5.24□□□□□ -1.57
LSM12-201ENST00000293406 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
LSM12-201ENST00000293406 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
LSM12-201ENST00000293406 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
LSM12-201ENST00000293406 NEBP20929 6669 aa5.03□□□□□ -1.6
LSM12-201ENST00000293406 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
LSM12-201ENST00000293406 SPRR2DP22532 72 aa5.01□□□□□ -1.61
LSM12-201ENST00000293406 MT3P25713 68 aa4.97□□□□□ -1.61
LSM12-201ENST00000293406 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
LSM12-201ENST00000293406 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
LSM12-201ENST00000293406 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
LSM12-201ENST00000293406 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
LSM12-201ENST00000293406 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
LSM12-201ENST00000293406 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
LSM12-201ENST00000293406 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
LSM12-201ENST00000293406 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
LSM12-201ENST00000293406 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
LSM12-201ENST00000293406 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
LSM12-201ENST00000293406 MT4P47944 62 aa4.43□□□□□ -1.7
LSM12-201ENST00000293406 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
LSM12-201ENST00000293406 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
LSM12-201ENST00000293406 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
LSM12-201ENST00000293406 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
LSM12-201ENST00000293406 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
LSM12-201ENST00000293406 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
LSM12-201ENST00000293406 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
LSM12-201ENST00000293406 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
LSM12-201ENST00000293406 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.78
LSM12-201ENST00000293406 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.78
LSM12-201ENST00000293406 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
LSM12-201ENST00000293406 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
LSM12-201ENST00000293406 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
LSM12-201ENST00000293406 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.84
LSM12-201ENST00000293406 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
LSM12-201ENST00000293406 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
LSM12-201ENST00000293406 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
LSM12-201ENST00000293406 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
LSM12-201ENST00000293406 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
LSM12-201ENST00000293406 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
LSM12-201ENST00000293406 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
LSM12-201ENST00000293406 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
LSM12-201ENST00000293406 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
LSM12-201ENST00000293406 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 128.4 ms