RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MT1GP13640 62 aa9.64□□□□□ -0.87
SSU72-201ENST00000291386 KRTAP2-2Q9BYT5 123 aa9.63□□□□□ -0.87
SSU72-201ENST00000291386 KRTAP2-1Q9BYU5 128 aa9.63□□□□□ -0.87
SSU72-201ENST00000291386 LCE3BQ5TA77 95 aa9.62□□□□□ -0.87
SSU72-201ENST00000291386 MT1LQ93083 61 aa9.62□□□□□ -0.87
SSU72-201ENST00000291386 KRTAP23-1A1A580 65 aa9.57□□□□□ -0.88
SSU72-201ENST00000291386 KRTAP12-3P60328 96 aa9.57□□□□□ -0.88
SSU72-201ENST00000291386 ROMO1P60602 79 aa9.54□□□□□ -0.88
SSU72-201ENST00000291386 PP632Q6XCG6 107 aa9.54□□□□□ -0.88
SSU72-201ENST00000291386 MT1MQ8N339 61 aa9.46□□□□□ -0.9
SSU72-201ENST00000291386 DSTQ03001 7570 aaKnown RBP9.4□□□□□ -0.91
SSU72-201ENST00000291386 KRTAP19-4Q3LI73 84 aa9.18□□□□□ -0.94
SSU72-201ENST00000291386 BRK1Q8WUW1 75 aa9.18□□□□□ -0.94
SSU72-201ENST00000291386 KRTAP4-3Q9BYR4 195 aa9.18□□□□□ -0.94
SSU72-201ENST00000291386 KRTAP15-1Q3LI76 137 aa9.12□□□□□ -0.95
SSU72-201ENST00000291386 KRTAP4-7Q9BYR0 210 aa9.12□□□□□ -0.95
SSU72-201ENST00000291386 LCE3CQ5T5A8 94 aa8.88□□□□□ -0.99
SSU72-201ENST00000291386 LCE4AQ5TA78 99 aa8.85□□□□□ -0.99
SSU72-201ENST00000291386 KRTAP5-4Q6L8H1 288 aa8.79□□□□□ -1
SSU72-201ENST00000291386 KRTAP4-9Q9BYQ8 210 aa8.78□□□□□ -1
SSU72-201ENST00000291386 PMAIP1Q13794 54 aa8.67□□□□□ -1.02
SSU72-201ENST00000291386 LCE1DQ5T752 114 aa8.67□□□□□ -1.02
SSU72-201ENST00000291386 KRTAP5-5Q701N2 237 aaPredicted RBP8.67□□□□□ -1.02
SSU72-201ENST00000291386 LOC100996750A0A140TA64 210 aa8.62□□□□□ -1.03
SSU72-201ENST00000291386 MT4P47944 62 aa8.6□□□□□ -1.03
SSU72-201ENST00000291386 HMCN1Q96RW7 5635 aa8.5□□□□□ -1.05
SSU72-201ENST00000291386 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
SSU72-201ENST00000291386 PRO0628Q9UI54 55 aa8.44□□□□□ -1.06
SSU72-201ENST00000291386 KRTAP9-6A8MVA2 160 aa8.35□□□□□ -1.07
SSU72-201ENST00000291386 SPRR5A0A1B0GTR4 108 aa8.28□□□□□ -1.08
SSU72-201ENST00000291386 KRTAP12-4P60329 112 aa8.28□□□□□ -1.08
SSU72-201ENST00000291386 SYNE1Q8NF91 8797 aaKnown RBP8.25□□□□□ -1.09
SSU72-201ENST00000291386 KRTAP20-2Q3LI61 65 aa8.23□□□□□ -1.09
SSU72-201ENST00000291386 PRAC1Q96KF2 57 aa8.22□□□□□ -1.09
SSU72-201ENST00000291386 MT1AP04731 61 aa8.2□□□□□ -1.1
SSU72-201ENST00000291386 GPR98Q8WXG9 6306 aa8.11□□□□□ -1.11
SSU72-201ENST00000291386 KRTAP6-1Q3LI64 71 aa8.1□□□□□ -1.11
SSU72-201ENST00000291386 AHNAK2Q8IVF2 5795 aa8.02□□□□□ -1.13
SSU72-201ENST00000291386 KRTAP5-3Q6L8H2 238 aa7.99□□□□□ -1.13
SSU72-201ENST00000291386 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
SSU72-201ENST00000291386 KRTAP9-4Q9BYQ2 154 aa7.88□□□□□ -1.15
SSU72-201ENST00000291386 KRTAP5-10Q6L8G5 202 aa7.84□□□□□ -1.15
SSU72-201ENST00000291386 KRTAP5-2Q701N4 177 aa7.78□□□□□ -1.16
SSU72-201ENST00000291386 KRTAP6-2Q3LI66 62 aa7.63□□□□□ -1.19
SSU72-201ENST00000291386 SVIPQ8NHG7 77 aa7.5□□□□□ -1.21
SSU72-201ENST00000291386 MT3P25713 68 aa7.48□□□□□ -1.21
SSU72-201ENST00000291386 KRTAP5-7Q6L8G8 165 aa7.48□□□□□ -1.21
SSU72-201ENST00000291386 KRTAP4-11Q9BYQ6 195 aa7.4□□□□□ -1.22
SSU72-201ENST00000291386 KRTAP5-8O75690 187 aa7.14□□□□□ -1.27
SSU72-201ENST00000291386 OBSCNQ5VST9 7968 aa7.12□□□□□ -1.27
SSU72-201ENST00000291386 LUZP6Q538Z0 58 aa6.89□□□□□ -1.31
SSU72-201ENST00000291386 KRTAP5-1Q6L8H4 278 aa6.88□□□□□ -1.31
SSU72-201ENST00000291386 LCE1EQ5T753 118 aa6.79□□□□□ -1.32
SSU72-201ENST00000291386 MUC5ACP98088 5654 aa6.72□□□□□ -1.33
SSU72-201ENST00000291386 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
SSU72-201ENST00000291386 MUC5BQ9HC84 5762 aaPredicted RBP6.55□□□□□ -1.36
SSU72-201ENST00000291386 H3BS24 57 aa6.52□□□□□ -1.37
SSU72-201ENST00000291386 LCE3DQ9BYE3 92 aa6.48□□□□□ -1.37
SSU72-201ENST00000291386 AHNAKQ09666 5890 aaKnown RBP6.47□□□□□ -1.37
SSU72-201ENST00000291386 KRTAP4-12Q9BQ66 201 aa6.37□□□□□ -1.39
SSU72-201ENST00000291386 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
SSU72-201ENST00000291386 LCE1CQ5T751 118 aa6.29□□□□□ -1.4
SSU72-201ENST00000291386 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
SSU72-201ENST00000291386 LCE3EQ5T5B0 92 aa6.19□□□□□ -1.42
SSU72-201ENST00000291386 NDUFAF8A1L188 74 aa5.93□□□□□ -1.46
SSU72-201ENST00000291386 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.81□□□□□ -1.48
SSU72-201ENST00000291386 KRTAP5-11Q6L8G4 156 aa5.65□□□□□ -1.5
SSU72-201ENST00000291386 LCE1FQ5T754 118 aa5.41□□□□□ -1.54
SSU72-201ENST00000291386 KRTAP21-2Q3LI59 83 aa5.35□□□□□ -1.55
SSU72-201ENST00000291386 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
SSU72-201ENST00000291386 INE1O15225 51 aa4.9□□□□□ -1.63
SSU72-201ENST00000291386 PRM1P04553 51 aa4.88□□□□□ -1.63
SSU72-201ENST00000291386 PHGR1C9JFL3 82 aa4.86□□□□□ -1.63
SSU72-201ENST00000291386 KRTAP4-4Q9BYR3 166 aa4.76□□□□□ -1.65
SSU72-201ENST00000291386 MUC19Q7Z5P9 8384 aa4.34□□□□□ -1.71
SSU72-201ENST00000291386 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
SSU72-201ENST00000291386 MUC16Q8WXI7 14507 aa3.13□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 57 ms