RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 RYR2Q92736 4967 aa3.89□□□□□ -1.79
NOTCH1-201ENST00000277541 PCLOQ9Y6V0 5065 aa3.89□□□□□ -1.79
NOTCH1-201ENST00000277541 MT1AP04731 61 aa3.89□□□□□ -1.79
NOTCH1-201ENST00000277541 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
NOTCH1-201ENST00000277541 HYDINQ4G0P3 5121 aa3.84□□□□□ -1.79
NOTCH1-201ENST00000277541 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
NOTCH1-201ENST00000277541 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
NOTCH1-201ENST00000277541 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
NOTCH1-201ENST00000277541 HERC2O95714 4834 aa3.66□□□□□ -1.82
NOTCH1-201ENST00000277541 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
NOTCH1-201ENST00000277541 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.82
NOTCH1-201ENST00000277541 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
NOTCH1-201ENST00000277541 BIRC6Q9NR09 4857 aa3.63□□□□□ -1.83
NOTCH1-201ENST00000277541 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
NOTCH1-201ENST00000277541 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
NOTCH1-201ENST00000277541 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
NOTCH1-201ENST00000277541 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
NOTCH1-201ENST00000277541 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
NOTCH1-201ENST00000277541 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
NOTCH1-201ENST00000277541 HERC1Q15751 4861 aa3.5□□□□□ -1.85
NOTCH1-201ENST00000277541 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
NOTCH1-201ENST00000277541 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
NOTCH1-201ENST00000277541 HMCN2Q8NDA2 5059 aa3.46□□□□□ -1.86
NOTCH1-201ENST00000277541 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
NOTCH1-201ENST00000277541 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
NOTCH1-201ENST00000277541 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
NOTCH1-201ENST00000277541 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
NOTCH1-201ENST00000277541 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
NOTCH1-201ENST00000277541 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
NOTCH1-201ENST00000277541 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
NOTCH1-201ENST00000277541 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
NOTCH1-201ENST00000277541 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
NOTCH1-201ENST00000277541 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
NOTCH1-201ENST00000277541 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
NOTCH1-201ENST00000277541 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
NOTCH1-201ENST00000277541 MUC2Q02817 5179 aa3.14□□□□□ -1.91
NOTCH1-201ENST00000277541 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
NOTCH1-201ENST00000277541 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
NOTCH1-201ENST00000277541 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.92
NOTCH1-201ENST00000277541 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
NOTCH1-201ENST00000277541 KMT2DO14686 5537 aa2.98□□□□□ -1.93
NOTCH1-201ENST00000277541 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
NOTCH1-201ENST00000277541 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
NOTCH1-201ENST00000277541 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
NOTCH1-201ENST00000277541 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
NOTCH1-201ENST00000277541 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
NOTCH1-201ENST00000277541 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
NOTCH1-201ENST00000277541 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
NOTCH1-201ENST00000277541 USH2AO75445 5202 aa2.69□□□□□ -1.98
NOTCH1-201ENST00000277541 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
NOTCH1-201ENST00000277541 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
NOTCH1-201ENST00000277541 NEBP20929 6669 aa2.63□□□□□ -1.99
NOTCH1-201ENST00000277541 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
NOTCH1-201ENST00000277541 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
NOTCH1-201ENST00000277541 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
NOTCH1-201ENST00000277541 MDN1Q9NU22 5596 aa2.48□□□□□ -2.01
NOTCH1-201ENST00000277541 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
NOTCH1-201ENST00000277541 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
NOTCH1-201ENST00000277541 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
NOTCH1-201ENST00000277541 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
NOTCH1-201ENST00000277541 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
NOTCH1-201ENST00000277541 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
NOTCH1-201ENST00000277541 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
NOTCH1-201ENST00000277541 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
NOTCH1-201ENST00000277541 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
NOTCH1-201ENST00000277541 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
NOTCH1-201ENST00000277541 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
NOTCH1-201ENST00000277541 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
NOTCH1-201ENST00000277541 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
NOTCH1-201ENST00000277541 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
NOTCH1-201ENST00000277541 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
NOTCH1-201ENST00000277541 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NOTCH1-201ENST00000277541 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
NOTCH1-201ENST00000277541 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
NOTCH1-201ENST00000277541 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
NOTCH1-201ENST00000277541 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
NOTCH1-201ENST00000277541 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 432 ms