RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
CCNA2-201ENST00000274026 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
CCNA2-201ENST00000274026 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.56
CCNA2-201ENST00000274026 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
CCNA2-201ENST00000274026 MT1GP13640 62 aa5.25□□□□□ -1.57
CCNA2-201ENST00000274026 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.58
CCNA2-201ENST00000274026 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
CCNA2-201ENST00000274026 MT1MQ8N339 61 aa5.13□□□□□ -1.59
CCNA2-201ENST00000274026 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
CCNA2-201ENST00000274026 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
CCNA2-201ENST00000274026 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
CCNA2-201ENST00000274026 KRTAP9-2Q9BYQ4 174 aa5.08□□□□□ -1.6
CCNA2-201ENST00000274026 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
CCNA2-201ENST00000274026 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
CCNA2-201ENST00000274026 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
CCNA2-201ENST00000274026 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
CCNA2-201ENST00000274026 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CCNA2-201ENST00000274026 MT1AP04731 61 aa4.9□□□□□ -1.62
CCNA2-201ENST00000274026 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
CCNA2-201ENST00000274026 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
CCNA2-201ENST00000274026 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
CCNA2-201ENST00000274026 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
CCNA2-201ENST00000274026 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
CCNA2-201ENST00000274026 PRM1P04553 51 aa4.75□□□□□ -1.65
CCNA2-201ENST00000274026 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
CCNA2-201ENST00000274026 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
CCNA2-201ENST00000274026 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
CCNA2-201ENST00000274026 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
CCNA2-201ENST00000274026 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
CCNA2-201ENST00000274026 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
CCNA2-201ENST00000274026 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
CCNA2-201ENST00000274026 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
CCNA2-201ENST00000274026 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
CCNA2-201ENST00000274026 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
CCNA2-201ENST00000274026 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
CCNA2-201ENST00000274026 SPRR2EP22531 72 aa4.36□□□□□ -1.71
CCNA2-201ENST00000274026 SPRR2BP35325 72 aa4.36□□□□□ -1.71
CCNA2-201ENST00000274026 SPRR2AP35326 72 aa4.36□□□□□ -1.71
CCNA2-201ENST00000274026 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
CCNA2-201ENST00000274026 MT3P25713 68 aa4.18□□□□□ -1.74
CCNA2-201ENST00000274026 SPRR2DP22532 72 aa4.16□□□□□ -1.74
CCNA2-201ENST00000274026 NEBP20929 6669 aa4.16□□□□□ -1.74
CCNA2-201ENST00000274026 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.74
CCNA2-201ENST00000274026 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
CCNA2-201ENST00000274026 MT4P47944 62 aa3.82□□□□□ -1.8
CCNA2-201ENST00000274026 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
CCNA2-201ENST00000274026 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
CCNA2-201ENST00000274026 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CCNA2-201ENST00000274026 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
CCNA2-201ENST00000274026 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
CCNA2-201ENST00000274026 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
CCNA2-201ENST00000274026 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
CCNA2-201ENST00000274026 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CCNA2-201ENST00000274026 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
CCNA2-201ENST00000274026 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
CCNA2-201ENST00000274026 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CCNA2-201ENST00000274026 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
CCNA2-201ENST00000274026 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
CCNA2-201ENST00000274026 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
CCNA2-201ENST00000274026 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
CCNA2-201ENST00000274026 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
CCNA2-201ENST00000274026 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CCNA2-201ENST00000274026 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
CCNA2-201ENST00000274026 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
CCNA2-201ENST00000274026 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
CCNA2-201ENST00000274026 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CCNA2-201ENST00000274026 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
CCNA2-201ENST00000274026 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
CCNA2-201ENST00000274026 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
CCNA2-201ENST00000274026 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
CCNA2-201ENST00000274026 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
CCNA2-201ENST00000274026 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CCNA2-201ENST00000274026 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
CCNA2-201ENST00000274026 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CCNA2-201ENST00000274026 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
CCNA2-201ENST00000274026 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CCNA2-201ENST00000274026 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms