RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
CTDSPL-201ENST00000273179 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
CTDSPL-201ENST00000273179 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
CTDSPL-201ENST00000273179 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
CTDSPL-201ENST00000273179 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
CTDSPL-201ENST00000273179 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
CTDSPL-201ENST00000273179 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
CTDSPL-201ENST00000273179 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
CTDSPL-201ENST00000273179 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
CTDSPL-201ENST00000273179 KRTAP4-8A0A0G2JLE6 195 aa2.86□□□□□ -1.95
CTDSPL-201ENST00000273179 KRTAP4-8Q9BYQ9 185 aa2.86□□□□□ -1.95
CTDSPL-201ENST00000273179 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
CTDSPL-201ENST00000273179 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
CTDSPL-201ENST00000273179 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
CTDSPL-201ENST00000273179 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
CTDSPL-201ENST00000273179 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-201ENST00000273179 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
CTDSPL-201ENST00000273179 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
CTDSPL-201ENST00000273179 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.97
CTDSPL-201ENST00000273179 KRTAP4-7Q9BYR0 210 aa2.71□□□□□ -1.98
CTDSPL-201ENST00000273179 SYNE2Q8WXH0 6885 aaKnown RBP2.69□□□□□ -1.98
CTDSPL-201ENST00000273179 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
CTDSPL-201ENST00000273179 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
CTDSPL-201ENST00000273179 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
CTDSPL-201ENST00000273179 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
CTDSPL-201ENST00000273179 MT1GP13640 62 aa2.63□□□□□ -1.99
CTDSPL-201ENST00000273179 MT1LQ93083 61 aa2.62□□□□□ -1.99
CTDSPL-201ENST00000273179 MT1EP04732 61 aa2.62□□□□□ -1.99
CTDSPL-201ENST00000273179 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
CTDSPL-201ENST00000273179 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
CTDSPL-201ENST00000273179 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
CTDSPL-201ENST00000273179 MDN1Q9NU22 5596 aa2.58□□□□□ -2
CTDSPL-201ENST00000273179 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
CTDSPL-201ENST00000273179 LCE3BQ5TA77 95 aa2.56□□□□□ -2
CTDSPL-201ENST00000273179 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
CTDSPL-201ENST00000273179 LOC100996750A0A140TA64 210 aa2.53□□□□□ -2
CTDSPL-201ENST00000273179 KRTAP4-6Q9BYQ5 205 aa2.52□□□□□ -2.01
CTDSPL-201ENST00000273179 MT1MQ8N339 61 aa2.49□□□□□ -2.01
CTDSPL-201ENST00000273179 SPRR2EP22531 72 aa2.45□□□□□ -2.02
CTDSPL-201ENST00000273179 SPRR2BP35325 72 aa2.45□□□□□ -2.02
CTDSPL-201ENST00000273179 SPRR2AP35326 72 aa2.45□□□□□ -2.02
CTDSPL-201ENST00000273179 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
CTDSPL-201ENST00000273179 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
CTDSPL-201ENST00000273179 KRTAP4-9Q9BYQ8 210 aa2.38□□□□□ -2.03
CTDSPL-201ENST00000273179 SPRR2DP22532 72 aa2.37□□□□□ -2.03
CTDSPL-201ENST00000273179 MT1AP04731 61 aa2.31□□□□□ -2.04
CTDSPL-201ENST00000273179 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
CTDSPL-201ENST00000273179 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
CTDSPL-201ENST00000273179 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
CTDSPL-201ENST00000273179 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
CTDSPL-201ENST00000273179 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CTDSPL-201ENST00000273179 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CTDSPL-201ENST00000273179 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
CTDSPL-201ENST00000273179 NEBP20929 6669 aa2.07□□□□□ -2.08
CTDSPL-201ENST00000273179 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
CTDSPL-201ENST00000273179 MT4P47944 62 aa2.03□□□□□ -2.08
CTDSPL-201ENST00000273179 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
CTDSPL-201ENST00000273179 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
CTDSPL-201ENST00000273179 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
CTDSPL-201ENST00000273179 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
CTDSPL-201ENST00000273179 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
CTDSPL-201ENST00000273179 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CTDSPL-201ENST00000273179 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
CTDSPL-201ENST00000273179 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
CTDSPL-201ENST00000273179 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CTDSPL-201ENST00000273179 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
CTDSPL-201ENST00000273179 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CTDSPL-201ENST00000273179 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
CTDSPL-201ENST00000273179 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CTDSPL-201ENST00000273179 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
CTDSPL-201ENST00000273179 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
CTDSPL-201ENST00000273179 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
CTDSPL-201ENST00000273179 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
CTDSPL-201ENST00000273179 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
CTDSPL-201ENST00000273179 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
CTDSPL-201ENST00000273179 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CTDSPL-201ENST00000273179 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms