RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
CNIH3-201ENST00000272133 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
CNIH3-201ENST00000272133 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CNIH3-201ENST00000272133 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
CNIH3-201ENST00000272133 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
CNIH3-201ENST00000272133 MT1GP13640 62 aa6.02□□□□□ -1.45
CNIH3-201ENST00000272133 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
CNIH3-201ENST00000272133 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
CNIH3-201ENST00000272133 MT1MQ8N339 61 aa5.89□□□□□ -1.47
CNIH3-201ENST00000272133 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
CNIH3-201ENST00000272133 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
CNIH3-201ENST00000272133 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
CNIH3-201ENST00000272133 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
CNIH3-201ENST00000272133 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
CNIH3-201ENST00000272133 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
CNIH3-201ENST00000272133 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
CNIH3-201ENST00000272133 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
CNIH3-201ENST00000272133 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
CNIH3-201ENST00000272133 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
CNIH3-201ENST00000272133 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
CNIH3-201ENST00000272133 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
CNIH3-201ENST00000272133 KRTAP5-9P26371 169 aa5.49□□□□□ -1.53
CNIH3-201ENST00000272133 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
CNIH3-201ENST00000272133 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
CNIH3-201ENST00000272133 MT1AP04731 61 aa5.43□□□□□ -1.54
CNIH3-201ENST00000272133 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
CNIH3-201ENST00000272133 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
CNIH3-201ENST00000272133 SPRR2EP22531 72 aa5.31□□□□□ -1.56
CNIH3-201ENST00000272133 SPRR2BP35325 72 aa5.31□□□□□ -1.56
CNIH3-201ENST00000272133 SPRR2AP35326 72 aa5.31□□□□□ -1.56
CNIH3-201ENST00000272133 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
CNIH3-201ENST00000272133 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
CNIH3-201ENST00000272133 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
CNIH3-201ENST00000272133 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
CNIH3-201ENST00000272133 PRM1P04553 51 aa5.23□□□□□ -1.57
CNIH3-201ENST00000272133 SPRR2DP22532 72 aa5.09□□□□□ -1.6
CNIH3-201ENST00000272133 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
CNIH3-201ENST00000272133 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CNIH3-201ENST00000272133 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
CNIH3-201ENST00000272133 NEBP20929 6669 aa4.95□□□□□ -1.62
CNIH3-201ENST00000272133 MT3P25713 68 aa4.74□□□□□ -1.65
CNIH3-201ENST00000272133 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
CNIH3-201ENST00000272133 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
CNIH3-201ENST00000272133 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
CNIH3-201ENST00000272133 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
CNIH3-201ENST00000272133 MT4P47944 62 aa4.5□□□□□ -1.69
CNIH3-201ENST00000272133 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
CNIH3-201ENST00000272133 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CNIH3-201ENST00000272133 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
CNIH3-201ENST00000272133 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
CNIH3-201ENST00000272133 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
CNIH3-201ENST00000272133 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
CNIH3-201ENST00000272133 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
CNIH3-201ENST00000272133 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
CNIH3-201ENST00000272133 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
CNIH3-201ENST00000272133 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
CNIH3-201ENST00000272133 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CNIH3-201ENST00000272133 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
CNIH3-201ENST00000272133 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
CNIH3-201ENST00000272133 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
CNIH3-201ENST00000272133 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
CNIH3-201ENST00000272133 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
CNIH3-201ENST00000272133 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
CNIH3-201ENST00000272133 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CNIH3-201ENST00000272133 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CNIH3-201ENST00000272133 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
CNIH3-201ENST00000272133 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
CNIH3-201ENST00000272133 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
CNIH3-201ENST00000272133 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
CNIH3-201ENST00000272133 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CNIH3-201ENST00000272133 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
CNIH3-201ENST00000272133 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
CNIH3-201ENST00000272133 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CNIH3-201ENST00000272133 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
CNIH3-201ENST00000272133 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.93
CNIH3-201ENST00000272133 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
CNIH3-201ENST00000272133 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 52.3 ms