RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 MT1EP04732 61 aa5.76□□□□□ -1.49
RTN1-201ENST00000267484 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
RTN1-201ENST00000267484 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
RTN1-201ENST00000267484 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
RTN1-201ENST00000267484 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
RTN1-201ENST00000267484 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.51
RTN1-201ENST00000267484 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
RTN1-201ENST00000267484 MT1GP13640 62 aa5.53□□□□□ -1.52
RTN1-201ENST00000267484 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
RTN1-201ENST00000267484 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
RTN1-201ENST00000267484 MT1MQ8N339 61 aa5.38□□□□□ -1.55
RTN1-201ENST00000267484 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
RTN1-201ENST00000267484 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
RTN1-201ENST00000267484 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
RTN1-201ENST00000267484 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
RTN1-201ENST00000267484 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
RTN1-201ENST00000267484 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
RTN1-201ENST00000267484 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
RTN1-201ENST00000267484 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
RTN1-201ENST00000267484 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
RTN1-201ENST00000267484 MDN1Q9NU22 5596 aa5□□□□□ -1.61
RTN1-201ENST00000267484 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
RTN1-201ENST00000267484 MT1AP04731 61 aa4.81□□□□□ -1.64
RTN1-201ENST00000267484 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
RTN1-201ENST00000267484 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
RTN1-201ENST00000267484 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
RTN1-201ENST00000267484 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
RTN1-201ENST00000267484 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
RTN1-201ENST00000267484 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
RTN1-201ENST00000267484 PRM1P04553 51 aa4.68□□□□□ -1.66
RTN1-201ENST00000267484 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
RTN1-201ENST00000267484 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
RTN1-201ENST00000267484 SPRR2EP22531 72 aa4.62□□□□□ -1.67
RTN1-201ENST00000267484 SPRR2BP35325 72 aa4.62□□□□□ -1.67
RTN1-201ENST00000267484 SPRR2AP35326 72 aa4.62□□□□□ -1.67
RTN1-201ENST00000267484 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
RTN1-201ENST00000267484 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
RTN1-201ENST00000267484 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
RTN1-201ENST00000267484 SPRR2DP22532 72 aa4.39□□□□□ -1.71
RTN1-201ENST00000267484 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
RTN1-201ENST00000267484 MT3P25713 68 aa4.3□□□□□ -1.72
RTN1-201ENST00000267484 NEBP20929 6669 aa4.29□□□□□ -1.72
RTN1-201ENST00000267484 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
RTN1-201ENST00000267484 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
RTN1-201ENST00000267484 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
RTN1-201ENST00000267484 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
RTN1-201ENST00000267484 MT4P47944 62 aa4□□□□□ -1.77
RTN1-201ENST00000267484 LCE1DQ5T752 114 aa4□□□□□ -1.77
RTN1-201ENST00000267484 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
RTN1-201ENST00000267484 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
RTN1-201ENST00000267484 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
RTN1-201ENST00000267484 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
RTN1-201ENST00000267484 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
RTN1-201ENST00000267484 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
RTN1-201ENST00000267484 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
RTN1-201ENST00000267484 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
RTN1-201ENST00000267484 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
RTN1-201ENST00000267484 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
RTN1-201ENST00000267484 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
RTN1-201ENST00000267484 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
RTN1-201ENST00000267484 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
RTN1-201ENST00000267484 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
RTN1-201ENST00000267484 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
RTN1-201ENST00000267484 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
RTN1-201ENST00000267484 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
RTN1-201ENST00000267484 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
RTN1-201ENST00000267484 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
RTN1-201ENST00000267484 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
RTN1-201ENST00000267484 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
RTN1-201ENST00000267484 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
RTN1-201ENST00000267484 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
RTN1-201ENST00000267484 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
RTN1-201ENST00000267484 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
RTN1-201ENST00000267484 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
RTN1-201ENST00000267484 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
RTN1-201ENST00000267484 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
RTN1-201ENST00000267484 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 57.8 ms