RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
AFF4-201ENST00000265343 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
AFF4-201ENST00000265343 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
AFF4-201ENST00000265343 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
AFF4-201ENST00000265343 LPAP08519 4548 aa3.91□□□□□ -1.78
AFF4-201ENST00000265343 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
AFF4-201ENST00000265343 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
AFF4-201ENST00000265343 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
AFF4-201ENST00000265343 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
AFF4-201ENST00000265343 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
AFF4-201ENST00000265343 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
AFF4-201ENST00000265343 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
AFF4-201ENST00000265343 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
AFF4-201ENST00000265343 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
AFF4-201ENST00000265343 BIRC6Q9NR09 4857 aa3.74□□□□□ -1.81
AFF4-201ENST00000265343 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
AFF4-201ENST00000265343 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
AFF4-201ENST00000265343 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
AFF4-201ENST00000265343 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
AFF4-201ENST00000265343 HERC2O95714 4834 aa3.65□□□□□ -1.82
AFF4-201ENST00000265343 RYR2Q92736 4967 aa3.64□□□□□ -1.83
AFF4-201ENST00000265343 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
AFF4-201ENST00000265343 HERC1Q15751 4861 aa3.57□□□□□ -1.84
AFF4-201ENST00000265343 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
AFF4-201ENST00000265343 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
AFF4-201ENST00000265343 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
AFF4-201ENST00000265343 HYDINQ4G0P3 5121 aa3.41□□□□□ -1.86
AFF4-201ENST00000265343 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
AFF4-201ENST00000265343 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
AFF4-201ENST00000265343 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
AFF4-201ENST00000265343 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
AFF4-201ENST00000265343 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
AFF4-201ENST00000265343 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.9
AFF4-201ENST00000265343 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
AFF4-201ENST00000265343 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
AFF4-201ENST00000265343 MUC2Q02817 5179 aa3.05□□□□□ -1.92
AFF4-201ENST00000265343 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
AFF4-201ENST00000265343 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
AFF4-201ENST00000265343 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
AFF4-201ENST00000265343 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
AFF4-201ENST00000265343 FAT4Q6V0I7 4981 aa2.93□□□□□ -1.94
AFF4-201ENST00000265343 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
AFF4-201ENST00000265343 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
AFF4-201ENST00000265343 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
AFF4-201ENST00000265343 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
AFF4-201ENST00000265343 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
AFF4-201ENST00000265343 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
AFF4-201ENST00000265343 KMT2DO14686 5537 aa2.77□□□□□ -1.97
AFF4-201ENST00000265343 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
AFF4-201ENST00000265343 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
AFF4-201ENST00000265343 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
AFF4-201ENST00000265343 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
AFF4-201ENST00000265343 NEBP20929 6669 aa2.57□□□□□ -2
AFF4-201ENST00000265343 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
AFF4-201ENST00000265343 USH2AO75445 5202 aa2.54□□□□□ -2
AFF4-201ENST00000265343 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
AFF4-201ENST00000265343 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
AFF4-201ENST00000265343 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
AFF4-201ENST00000265343 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
AFF4-201ENST00000265343 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
AFF4-201ENST00000265343 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
AFF4-201ENST00000265343 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
AFF4-201ENST00000265343 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
AFF4-201ENST00000265343 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
AFF4-201ENST00000265343 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
AFF4-201ENST00000265343 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
AFF4-201ENST00000265343 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
AFF4-201ENST00000265343 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
AFF4-201ENST00000265343 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
AFF4-201ENST00000265343 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
AFF4-201ENST00000265343 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
AFF4-201ENST00000265343 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
AFF4-201ENST00000265343 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
AFF4-201ENST00000265343 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
AFF4-201ENST00000265343 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
AFF4-201ENST00000265343 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
AFF4-201ENST00000265343 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 14.2 ms