RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
SSBP1-201ENST00000265304 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
SSBP1-201ENST00000265304 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
SSBP1-201ENST00000265304 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SSBP1-201ENST00000265304 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
SSBP1-201ENST00000265304 ROMO1P60602 79 aa5.32□□□□□ -1.56
SSBP1-201ENST00000265304 NEBP20929 6669 aa5.31□□□□□ -1.56
SSBP1-201ENST00000265304 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
SSBP1-201ENST00000265304 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
SSBP1-201ENST00000265304 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
SSBP1-201ENST00000265304 MT1EP04732 61 aa5.28□□□□□ -1.56
SSBP1-201ENST00000265304 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
SSBP1-201ENST00000265304 SPRR2EP22531 72 aa5.22□□□□□ -1.57
SSBP1-201ENST00000265304 SPRR2BP35325 72 aa5.22□□□□□ -1.57
SSBP1-201ENST00000265304 SPRR2AP35326 72 aa5.22□□□□□ -1.57
SSBP1-201ENST00000265304 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
SSBP1-201ENST00000265304 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
SSBP1-201ENST00000265304 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
SSBP1-201ENST00000265304 MT1GP13640 62 aa5.11□□□□□ -1.59
SSBP1-201ENST00000265304 MT1LQ93083 61 aa5.11□□□□□ -1.59
SSBP1-201ENST00000265304 SPRR2DP22532 72 aa5.04□□□□□ -1.6
SSBP1-201ENST00000265304 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
SSBP1-201ENST00000265304 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
SSBP1-201ENST00000265304 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
SSBP1-201ENST00000265304 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
SSBP1-201ENST00000265304 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
SSBP1-201ENST00000265304 MT1MQ8N339 61 aa4.99□□□□□ -1.61
SSBP1-201ENST00000265304 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
SSBP1-201ENST00000265304 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
SSBP1-201ENST00000265304 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
SSBP1-201ENST00000265304 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
SSBP1-201ENST00000265304 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
SSBP1-201ENST00000265304 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
SSBP1-201ENST00000265304 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
SSBP1-201ENST00000265304 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
SSBP1-201ENST00000265304 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
SSBP1-201ENST00000265304 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
SSBP1-201ENST00000265304 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
SSBP1-201ENST00000265304 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
SSBP1-201ENST00000265304 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SSBP1-201ENST00000265304 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
SSBP1-201ENST00000265304 MT1AP04731 61 aa4.36□□□□□ -1.71
SSBP1-201ENST00000265304 MT4P47944 62 aa4.35□□□□□ -1.71
SSBP1-201ENST00000265304 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
SSBP1-201ENST00000265304 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
SSBP1-201ENST00000265304 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
SSBP1-201ENST00000265304 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SSBP1-201ENST00000265304 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
SSBP1-201ENST00000265304 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
SSBP1-201ENST00000265304 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SSBP1-201ENST00000265304 MT3P25713 68 aa4.1□□□□□ -1.75
SSBP1-201ENST00000265304 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SSBP1-201ENST00000265304 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
SSBP1-201ENST00000265304 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
SSBP1-201ENST00000265304 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
SSBP1-201ENST00000265304 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
SSBP1-201ENST00000265304 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SSBP1-201ENST00000265304 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
SSBP1-201ENST00000265304 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
SSBP1-201ENST00000265304 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
SSBP1-201ENST00000265304 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SSBP1-201ENST00000265304 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SSBP1-201ENST00000265304 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SSBP1-201ENST00000265304 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
SSBP1-201ENST00000265304 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SSBP1-201ENST00000265304 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SSBP1-201ENST00000265304 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
SSBP1-201ENST00000265304 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
SSBP1-201ENST00000265304 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
SSBP1-201ENST00000265304 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
SSBP1-201ENST00000265304 INE1O15225 51 aa2.96□□□□□ -1.94
SSBP1-201ENST00000265304 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SSBP1-201ENST00000265304 PRM1P04553 51 aa2.71□□□□□ -1.98
SSBP1-201ENST00000265304 PHGR1C9JFL3 82 aa2.57□□□□□ -2
SSBP1-201ENST00000265304 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SSBP1-201ENST00000265304 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SSBP1-201ENST00000265304 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms