RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
PCNP-201ENST00000265260 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
PCNP-201ENST00000265260 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
PCNP-201ENST00000265260 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
PCNP-201ENST00000265260 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
PCNP-201ENST00000265260 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
PCNP-201ENST00000265260 MT1LQ93083 61 aa5.51□□□□□ -1.53
PCNP-201ENST00000265260 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
PCNP-201ENST00000265260 KMT2DO14686 5537 aa5.49□□□□□ -1.53
PCNP-201ENST00000265260 MT1EP04732 61 aa5.43□□□□□ -1.54
PCNP-201ENST00000265260 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
PCNP-201ENST00000265260 KRTAP12-4P60329 112 aa5.34□□□□□ -1.56
PCNP-201ENST00000265260 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
PCNP-201ENST00000265260 MT1GP13640 62 aa5.14□□□□□ -1.59
PCNP-201ENST00000265260 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
PCNP-201ENST00000265260 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
PCNP-201ENST00000265260 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
PCNP-201ENST00000265260 MT1MQ8N339 61 aa5.03□□□□□ -1.6
PCNP-201ENST00000265260 NEBP20929 6669 aa5.01□□□□□ -1.61
PCNP-201ENST00000265260 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
PCNP-201ENST00000265260 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
PCNP-201ENST00000265260 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.61
PCNP-201ENST00000265260 MT1AP04731 61 aa4.95□□□□□ -1.62
PCNP-201ENST00000265260 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
PCNP-201ENST00000265260 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
PCNP-201ENST00000265260 SPRR2EP22531 72 aa4.84□□□□□ -1.64
PCNP-201ENST00000265260 SPRR2BP35325 72 aa4.84□□□□□ -1.64
PCNP-201ENST00000265260 SPRR2AP35326 72 aa4.84□□□□□ -1.64
PCNP-201ENST00000265260 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
PCNP-201ENST00000265260 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
PCNP-201ENST00000265260 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
PCNP-201ENST00000265260 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
PCNP-201ENST00000265260 PRM1P04553 51 aa4.78□□□□□ -1.64
PCNP-201ENST00000265260 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
PCNP-201ENST00000265260 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
PCNP-201ENST00000265260 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
PCNP-201ENST00000265260 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
PCNP-201ENST00000265260 SPRR2DP22532 72 aa4.66□□□□□ -1.66
PCNP-201ENST00000265260 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
PCNP-201ENST00000265260 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
PCNP-201ENST00000265260 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
PCNP-201ENST00000265260 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
PCNP-201ENST00000265260 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
PCNP-201ENST00000265260 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
PCNP-201ENST00000265260 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
PCNP-201ENST00000265260 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
PCNP-201ENST00000265260 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.72
PCNP-201ENST00000265260 MT4P47944 62 aa4.16□□□□□ -1.74
PCNP-201ENST00000265260 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
PCNP-201ENST00000265260 MT3P25713 68 aa4.11□□□□□ -1.75
PCNP-201ENST00000265260 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.77
PCNP-201ENST00000265260 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
PCNP-201ENST00000265260 LCE4AQ5TA78 99 aa4□□□□□ -1.77
PCNP-201ENST00000265260 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
PCNP-201ENST00000265260 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
PCNP-201ENST00000265260 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
PCNP-201ENST00000265260 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
PCNP-201ENST00000265260 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
PCNP-201ENST00000265260 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
PCNP-201ENST00000265260 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
PCNP-201ENST00000265260 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
PCNP-201ENST00000265260 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
PCNP-201ENST00000265260 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
PCNP-201ENST00000265260 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
PCNP-201ENST00000265260 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
PCNP-201ENST00000265260 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
PCNP-201ENST00000265260 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
PCNP-201ENST00000265260 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
PCNP-201ENST00000265260 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
PCNP-201ENST00000265260 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
PCNP-201ENST00000265260 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PCNP-201ENST00000265260 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
PCNP-201ENST00000265260 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PCNP-201ENST00000265260 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
PCNP-201ENST00000265260 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
PCNP-201ENST00000265260 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
PCNP-201ENST00000265260 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 55.1 ms