RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
NEIL3-201ENST00000264596 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
NEIL3-201ENST00000264596 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
NEIL3-201ENST00000264596 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
NEIL3-201ENST00000264596 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
NEIL3-201ENST00000264596 MT1GP13640 62 aa6.43□□□□□ -1.38
NEIL3-201ENST00000264596 MT1MQ8N339 61 aa6.4□□□□□ -1.39
NEIL3-201ENST00000264596 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
NEIL3-201ENST00000264596 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
NEIL3-201ENST00000264596 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
NEIL3-201ENST00000264596 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
NEIL3-201ENST00000264596 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
NEIL3-201ENST00000264596 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
NEIL3-201ENST00000264596 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.46
NEIL3-201ENST00000264596 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
NEIL3-201ENST00000264596 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
NEIL3-201ENST00000264596 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
NEIL3-201ENST00000264596 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.48
NEIL3-201ENST00000264596 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
NEIL3-201ENST00000264596 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
NEIL3-201ENST00000264596 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
NEIL3-201ENST00000264596 MT1AP04731 61 aa5.73□□□□□ -1.49
NEIL3-201ENST00000264596 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
NEIL3-201ENST00000264596 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
NEIL3-201ENST00000264596 SPRR2EP22531 72 aa5.64□□□□□ -1.51
NEIL3-201ENST00000264596 SPRR2BP35325 72 aa5.64□□□□□ -1.51
NEIL3-201ENST00000264596 SPRR2AP35326 72 aa5.64□□□□□ -1.51
NEIL3-201ENST00000264596 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
NEIL3-201ENST00000264596 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
NEIL3-201ENST00000264596 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
NEIL3-201ENST00000264596 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.55
NEIL3-201ENST00000264596 SPRR2DP22532 72 aa5.39□□□□□ -1.55
NEIL3-201ENST00000264596 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
NEIL3-201ENST00000264596 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
NEIL3-201ENST00000264596 PRM1P04553 51 aa5.3□□□□□ -1.56
NEIL3-201ENST00000264596 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
NEIL3-201ENST00000264596 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
NEIL3-201ENST00000264596 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
NEIL3-201ENST00000264596 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.58
NEIL3-201ENST00000264596 MT3P25713 68 aa5.15□□□□□ -1.59
NEIL3-201ENST00000264596 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
NEIL3-201ENST00000264596 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
NEIL3-201ENST00000264596 NEBP20929 6669 aa4.89□□□□□ -1.63
NEIL3-201ENST00000264596 MT4P47944 62 aa4.79□□□□□ -1.64
NEIL3-201ENST00000264596 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
NEIL3-201ENST00000264596 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
NEIL3-201ENST00000264596 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
NEIL3-201ENST00000264596 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
NEIL3-201ENST00000264596 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
NEIL3-201ENST00000264596 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
NEIL3-201ENST00000264596 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
NEIL3-201ENST00000264596 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
NEIL3-201ENST00000264596 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
NEIL3-201ENST00000264596 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
NEIL3-201ENST00000264596 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
NEIL3-201ENST00000264596 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
NEIL3-201ENST00000264596 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
NEIL3-201ENST00000264596 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
NEIL3-201ENST00000264596 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
NEIL3-201ENST00000264596 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
NEIL3-201ENST00000264596 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
NEIL3-201ENST00000264596 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
NEIL3-201ENST00000264596 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
NEIL3-201ENST00000264596 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
NEIL3-201ENST00000264596 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
NEIL3-201ENST00000264596 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
NEIL3-201ENST00000264596 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
NEIL3-201ENST00000264596 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
NEIL3-201ENST00000264596 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
NEIL3-201ENST00000264596 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
NEIL3-201ENST00000264596 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
NEIL3-201ENST00000264596 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
NEIL3-201ENST00000264596 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
NEIL3-201ENST00000264596 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
NEIL3-201ENST00000264596 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
NEIL3-201ENST00000264596 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NEIL3-201ENST00000264596 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms