RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 KRTAP19-3Q7Z4W3 81 aa1.87□□□□□ -2.11
CDH19-201ENST00000262150 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.86□□□□□ -2.11
CDH19-201ENST00000262150 MT1EP04732 61 aa1.85□□□□□ -2.11
CDH19-201ENST00000262150 USH2AO75445 5202 aa1.82□□□□□ -2.12
CDH19-201ENST00000262150 KRTAP6-3Q3LI67 103 aa1.82□□□□□ -2.12
CDH19-201ENST00000262150 MT1LQ93083 61 aa1.82□□□□□ -2.12
CDH19-201ENST00000262150 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
CDH19-201ENST00000262150 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
CDH19-201ENST00000262150 LCE3BQ5TA77 95 aa1.81□□□□□ -2.12
CDH19-201ENST00000262150 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
CDH19-201ENST00000262150 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
CDH19-201ENST00000262150 MT1MQ8N339 61 aa1.79□□□□□ -2.12
CDH19-201ENST00000262150 MT4P47944 62 aa1.76□□□□□ -2.13
CDH19-201ENST00000262150 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
CDH19-201ENST00000262150 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
CDH19-201ENST00000262150 INE1O15225 51 aa1.74□□□□□ -2.13
CDH19-201ENST00000262150 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
CDH19-201ENST00000262150 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
CDH19-201ENST00000262150 KRTAP4-12Q9BQ66 201 aa1.72□□□□□ -2.13
CDH19-201ENST00000262150 LCE1AQ5T7P2 110 aa1.71□□□□□ -2.14
CDH19-201ENST00000262150 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
CDH19-201ENST00000262150 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
CDH19-201ENST00000262150 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
CDH19-201ENST00000262150 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
CDH19-201ENST00000262150 KRTAP2-2Q9BYT5 123 aa1.67□□□□□ -2.14
CDH19-201ENST00000262150 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
CDH19-201ENST00000262150 LCE5AQ5TCM9 118 aa1.65□□□□□ -2.14
CDH19-201ENST00000262150 KRTAP4-9Q9BYQ8 210 aa1.63□□□□□ -2.15
CDH19-201ENST00000262150 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
CDH19-201ENST00000262150 NEBP20929 6669 aa1.62□□□□□ -2.15
CDH19-201ENST00000262150 MT3P25713 68 aa1.62□□□□□ -2.15
CDH19-201ENST00000262150 KRTAP5-9P26371 169 aa1.62□□□□□ -2.15
CDH19-201ENST00000262150 KMT2DO14686 5537 aa1.61□□□□□ -2.15
CDH19-201ENST00000262150 MT1AP04731 61 aa1.61□□□□□ -2.15
CDH19-201ENST00000262150 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
CDH19-201ENST00000262150 KRTAP9-9Q9BYP9 154 aa1.61□□□□□ -2.15
CDH19-201ENST00000262150 KRTAP9-4Q9BYQ2 154 aa1.61□□□□□ -2.15
CDH19-201ENST00000262150 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
CDH19-201ENST00000262150 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
CDH19-201ENST00000262150 LCE4AQ5TA78 99 aa1.6□□□□□ -2.15
CDH19-201ENST00000262150 KRTAP4-2Q9BYR5 136 aa1.56□□□□□ -2.16
CDH19-201ENST00000262150 LCE3EQ5T5B0 92 aa1.56□□□□□ -2.16
CDH19-201ENST00000262150 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
CDH19-201ENST00000262150 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
CDH19-201ENST00000262150 LCE1DQ5T752 114 aa1.54□□□□□ -2.16
CDH19-201ENST00000262150 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.17
CDH19-201ENST00000262150 LCE1BQ5T7P3 118 aa1.52□□□□□ -2.17
CDH19-201ENST00000262150 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
CDH19-201ENST00000262150 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
CDH19-201ENST00000262150 MDN1Q9NU22 5596 aa1.51□□□□□ -2.17
CDH19-201ENST00000262150 OBSCNQ5VST9 7968 aa1.48□□□□□ -2.17
CDH19-201ENST00000262150 KRTAP5-3Q6L8H2 238 aa1.47□□□□□ -2.17
CDH19-201ENST00000262150 KRTAP4-11Q9BYQ6 195 aa1.44□□□□□ -2.18
CDH19-201ENST00000262150 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
CDH19-201ENST00000262150 PRM1P04553 51 aa1.36□□□□□ -2.19
CDH19-201ENST00000262150 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
CDH19-201ENST00000262150 KRTAP5-4Q6L8H1 288 aa1.34□□□□□ -2.2
CDH19-201ENST00000262150 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
CDH19-201ENST00000262150 KRTAP5-5Q701N2 237 aaPredicted RBP1.29□□□□□ -2.2
CDH19-201ENST00000262150 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
CDH19-201ENST00000262150 LCE1EQ5T753 118 aa1.27□□□□□ -2.21
CDH19-201ENST00000262150 LCE1FQ5T754 118 aa1.27□□□□□ -2.21
CDH19-201ENST00000262150 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
CDH19-201ENST00000262150 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
CDH19-201ENST00000262150 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
CDH19-201ENST00000262150 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
CDH19-201ENST00000262150 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
CDH19-201ENST00000262150 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
CDH19-201ENST00000262150 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
CDH19-201ENST00000262150 AHNAKQ09666 5890 aaKnown RBP1.03□□□□□ -2.24
CDH19-201ENST00000262150 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
CDH19-201ENST00000262150 KRTAP5-7Q6L8G8 165 aa0.99□□□□□ -2.25
CDH19-201ENST00000262150 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
CDH19-201ENST00000262150 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
CDH19-201ENST00000262150 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
CDH19-201ENST00000262150 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
CDH19-201ENST00000262150 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 117.5 ms