RNA–Protein interactions for RNA: ENST00000261854.9

SPPL2A-201, Transcript of signal peptide peptidase like 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL2A, Length 7,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-201ENST00000261854 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
SPPL2A-201ENST00000261854 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
SPPL2A-201ENST00000261854 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
SPPL2A-201ENST00000261854 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
SPPL2A-201ENST00000261854 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
SPPL2A-201ENST00000261854 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
SPPL2A-201ENST00000261854 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SPPL2A-201ENST00000261854 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
SPPL2A-201ENST00000261854 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
SPPL2A-201ENST00000261854 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
SPPL2A-201ENST00000261854 PCLOQ9Y6V0 5065 aa4.16□□□□□ -1.74
SPPL2A-201ENST00000261854 HERC1Q15751 4861 aa4.13□□□□□ -1.75
SPPL2A-201ENST00000261854 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
SPPL2A-201ENST00000261854 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.75
SPPL2A-201ENST00000261854 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
SPPL2A-201ENST00000261854 KRTAP19-2Q3LHN2 52 aa3.97□□□□□ -1.77
SPPL2A-201ENST00000261854 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
SPPL2A-201ENST00000261854 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
SPPL2A-201ENST00000261854 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
SPPL2A-201ENST00000261854 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
SPPL2A-201ENST00000261854 RNF213Q63HN8 5207 aa3.92□□□□□ -1.78
SPPL2A-201ENST00000261854 MT1AP04731 61 aa3.91□□□□□ -1.78
SPPL2A-201ENST00000261854 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SPPL2A-201ENST00000261854 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
SPPL2A-201ENST00000261854 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
SPPL2A-201ENST00000261854 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
SPPL2A-201ENST00000261854 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
SPPL2A-201ENST00000261854 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
SPPL2A-201ENST00000261854 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
SPPL2A-201ENST00000261854 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
SPPL2A-201ENST00000261854 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
SPPL2A-201ENST00000261854 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
SPPL2A-201ENST00000261854 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
SPPL2A-201ENST00000261854 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
SPPL2A-201ENST00000261854 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
SPPL2A-201ENST00000261854 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SPPL2A-201ENST00000261854 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
SPPL2A-201ENST00000261854 MUC2Q02817 5179 aa3.48□□□□□ -1.85
SPPL2A-201ENST00000261854 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
SPPL2A-201ENST00000261854 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SPPL2A-201ENST00000261854 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
SPPL2A-201ENST00000261854 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
SPPL2A-201ENST00000261854 USH2AO75445 5202 aa3.35□□□□□ -1.87
SPPL2A-201ENST00000261854 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SPPL2A-201ENST00000261854 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
SPPL2A-201ENST00000261854 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
SPPL2A-201ENST00000261854 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
SPPL2A-201ENST00000261854 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
SPPL2A-201ENST00000261854 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
SPPL2A-201ENST00000261854 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.92
SPPL2A-201ENST00000261854 KMT2DO14686 5537 aa3.09□□□□□ -1.92
SPPL2A-201ENST00000261854 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
SPPL2A-201ENST00000261854 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
SPPL2A-201ENST00000261854 NEBP20929 6669 aa2.83□□□□□ -1.96
SPPL2A-201ENST00000261854 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
SPPL2A-201ENST00000261854 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
SPPL2A-201ENST00000261854 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SPPL2A-201ENST00000261854 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
SPPL2A-201ENST00000261854 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SPPL2A-201ENST00000261854 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
SPPL2A-201ENST00000261854 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
SPPL2A-201ENST00000261854 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SPPL2A-201ENST00000261854 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
SPPL2A-201ENST00000261854 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
SPPL2A-201ENST00000261854 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
SPPL2A-201ENST00000261854 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
SPPL2A-201ENST00000261854 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
SPPL2A-201ENST00000261854 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SPPL2A-201ENST00000261854 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
SPPL2A-201ENST00000261854 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
SPPL2A-201ENST00000261854 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
SPPL2A-201ENST00000261854 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
SPPL2A-201ENST00000261854 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SPPL2A-201ENST00000261854 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
SPPL2A-201ENST00000261854 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
SPPL2A-201ENST00000261854 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
SPPL2A-201ENST00000261854 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms