RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.39
SCARB1-201ENST00000261693 FCGBPQ9Y6R7 5405 aaPredicted RBP6.39□□□□□ -1.39
SCARB1-201ENST00000261693 MUC12Q9UKN1 5478 aa6.37□□□□□ -1.39
SCARB1-201ENST00000261693 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
SCARB1-201ENST00000261693 MT1GP13640 62 aa6.29□□□□□ -1.4
SCARB1-201ENST00000261693 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
SCARB1-201ENST00000261693 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
SCARB1-201ENST00000261693 MT1MQ8N339 61 aa6.18□□□□□ -1.42
SCARB1-201ENST00000261693 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
SCARB1-201ENST00000261693 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.43
SCARB1-201ENST00000261693 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
SCARB1-201ENST00000261693 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
SCARB1-201ENST00000261693 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
SCARB1-201ENST00000261693 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
SCARB1-201ENST00000261693 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
SCARB1-201ENST00000261693 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
SCARB1-201ENST00000261693 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
SCARB1-201ENST00000261693 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
SCARB1-201ENST00000261693 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
SCARB1-201ENST00000261693 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
SCARB1-201ENST00000261693 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
SCARB1-201ENST00000261693 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
SCARB1-201ENST00000261693 MT1AP04731 61 aa5.58□□□□□ -1.52
SCARB1-201ENST00000261693 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
SCARB1-201ENST00000261693 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
SCARB1-201ENST00000261693 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
SCARB1-201ENST00000261693 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
SCARB1-201ENST00000261693 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
SCARB1-201ENST00000261693 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
SCARB1-201ENST00000261693 SPRR2EP22531 72 aa5.32□□□□□ -1.56
SCARB1-201ENST00000261693 SPRR2BP35325 72 aa5.32□□□□□ -1.56
SCARB1-201ENST00000261693 SPRR2AP35326 72 aa5.32□□□□□ -1.56
SCARB1-201ENST00000261693 PRM1P04553 51 aa5.31□□□□□ -1.56
SCARB1-201ENST00000261693 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
SCARB1-201ENST00000261693 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
SCARB1-201ENST00000261693 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
SCARB1-201ENST00000261693 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
SCARB1-201ENST00000261693 SPRR2DP22532 72 aa5.07□□□□□ -1.6
SCARB1-201ENST00000261693 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
SCARB1-201ENST00000261693 MT3P25713 68 aa4.97□□□□□ -1.61
SCARB1-201ENST00000261693 NEBP20929 6669 aa4.82□□□□□ -1.64
SCARB1-201ENST00000261693 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
SCARB1-201ENST00000261693 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
SCARB1-201ENST00000261693 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
SCARB1-201ENST00000261693 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
SCARB1-201ENST00000261693 MT4P47944 62 aa4.56□□□□□ -1.68
SCARB1-201ENST00000261693 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
SCARB1-201ENST00000261693 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SCARB1-201ENST00000261693 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
SCARB1-201ENST00000261693 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
SCARB1-201ENST00000261693 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
SCARB1-201ENST00000261693 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
SCARB1-201ENST00000261693 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
SCARB1-201ENST00000261693 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SCARB1-201ENST00000261693 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
SCARB1-201ENST00000261693 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
SCARB1-201ENST00000261693 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SCARB1-201ENST00000261693 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
SCARB1-201ENST00000261693 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SCARB1-201ENST00000261693 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
SCARB1-201ENST00000261693 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
SCARB1-201ENST00000261693 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
SCARB1-201ENST00000261693 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
SCARB1-201ENST00000261693 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SCARB1-201ENST00000261693 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
SCARB1-201ENST00000261693 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
SCARB1-201ENST00000261693 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SCARB1-201ENST00000261693 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
SCARB1-201ENST00000261693 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SCARB1-201ENST00000261693 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
SCARB1-201ENST00000261693 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
SCARB1-201ENST00000261693 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
SCARB1-201ENST00000261693 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
SCARB1-201ENST00000261693 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
SCARB1-201ENST00000261693 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
SCARB1-201ENST00000261693 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
SCARB1-201ENST00000261693 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms