RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
BRIP1-201ENST00000259008 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
BRIP1-201ENST00000259008 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
BRIP1-201ENST00000259008 KRTAP4-7Q9BYR0 210 aa2.14□□□□□ -2.07
BRIP1-201ENST00000259008 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
BRIP1-201ENST00000259008 KRTAP19-4Q3LI73 84 aa2.12□□□□□ -2.07
BRIP1-201ENST00000259008 USH2AO75445 5202 aa2.11□□□□□ -2.07
BRIP1-201ENST00000259008 MT1EP04732 61 aa2.11□□□□□ -2.07
BRIP1-201ENST00000259008 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.1□□□□□ -2.07
BRIP1-201ENST00000259008 MT1LQ93083 61 aa2.09□□□□□ -2.07
BRIP1-201ENST00000259008 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
BRIP1-201ENST00000259008 MT1MQ8N339 61 aa2.06□□□□□ -2.08
BRIP1-201ENST00000259008 LOC100996750A0A140TA64 210 aa2.06□□□□□ -2.08
BRIP1-201ENST00000259008 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
BRIP1-201ENST00000259008 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
BRIP1-201ENST00000259008 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
BRIP1-201ENST00000259008 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
BRIP1-201ENST00000259008 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
BRIP1-201ENST00000259008 KRTAP4-9Q9BYQ8 210 aa2.01□□□□□ -2.09
BRIP1-201ENST00000259008 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
BRIP1-201ENST00000259008 LCE1DQ5T752 114 aa1.98□□□□□ -2.09
BRIP1-201ENST00000259008 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
BRIP1-201ENST00000259008 KMT2DO14686 5537 aa1.97□□□□□ -2.09
BRIP1-201ENST00000259008 MT3P25713 68 aa1.96□□□□□ -2.1
BRIP1-201ENST00000259008 KRTAP2-2Q9BYT5 123 aa1.93□□□□□ -2.1
BRIP1-201ENST00000259008 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
BRIP1-201ENST00000259008 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
BRIP1-201ENST00000259008 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
BRIP1-201ENST00000259008 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.11
BRIP1-201ENST00000259008 LCE5AQ5TCM9 118 aa1.89□□□□□ -2.11
BRIP1-201ENST00000259008 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
BRIP1-201ENST00000259008 LCE4AQ5TA78 99 aa1.85□□□□□ -2.11
BRIP1-201ENST00000259008 MT1AP04731 61 aa1.85□□□□□ -2.11
BRIP1-201ENST00000259008 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
BRIP1-201ENST00000259008 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
BRIP1-201ENST00000259008 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
BRIP1-201ENST00000259008 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
BRIP1-201ENST00000259008 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
BRIP1-201ENST00000259008 MACF1Q9UPN3 7388 aaKnown RBP1.78□□□□□ -2.13
BRIP1-201ENST00000259008 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
BRIP1-201ENST00000259008 KRTAP9-4Q9BYQ2 154 aa1.76□□□□□ -2.13
BRIP1-201ENST00000259008 PRM1P04553 51 aa1.76□□□□□ -2.13
BRIP1-201ENST00000259008 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
BRIP1-201ENST00000259008 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
BRIP1-201ENST00000259008 NEBP20929 6669 aa1.74□□□□□ -2.13
BRIP1-201ENST00000259008 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
BRIP1-201ENST00000259008 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
BRIP1-201ENST00000259008 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
BRIP1-201ENST00000259008 KRTAP5-9P26371 169 aa1.69□□□□□ -2.14
BRIP1-201ENST00000259008 KRTAP9-9Q9BYP9 154 aa1.69□□□□□ -2.14
BRIP1-201ENST00000259008 KRTAP4-6Q9BYQ5 205 aa1.66□□□□□ -2.14
BRIP1-201ENST00000259008 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
BRIP1-201ENST00000259008 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
BRIP1-201ENST00000259008 KRTAP5-5Q701N2 237 aaPredicted RBP1.48□□□□□ -2.17
BRIP1-201ENST00000259008 KRTAP4-12Q9BQ66 201 aa1.47□□□□□ -2.17
BRIP1-201ENST00000259008 KRTAP4-2Q9BYR5 136 aa1.47□□□□□ -2.17
BRIP1-201ENST00000259008 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
BRIP1-201ENST00000259008 KRTAP4-11Q9BYQ6 195 aa1.43□□□□□ -2.18
BRIP1-201ENST00000259008 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
BRIP1-201ENST00000259008 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
BRIP1-201ENST00000259008 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
BRIP1-201ENST00000259008 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
BRIP1-201ENST00000259008 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
BRIP1-201ENST00000259008 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
BRIP1-201ENST00000259008 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
BRIP1-201ENST00000259008 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
BRIP1-201ENST00000259008 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
BRIP1-201ENST00000259008 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
BRIP1-201ENST00000259008 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
BRIP1-201ENST00000259008 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
BRIP1-201ENST00000259008 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
BRIP1-201ENST00000259008 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
BRIP1-201ENST00000259008 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
BRIP1-201ENST00000259008 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
BRIP1-201ENST00000259008 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
BRIP1-201ENST00000259008 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
BRIP1-201ENST00000259008 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms