RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
UPK3B-201ENST00000257632 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
UPK3B-201ENST00000257632 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
UPK3B-201ENST00000257632 MT1GP13640 62 aa6.7□□□□□ -1.34
UPK3B-201ENST00000257632 GPR98Q8WXG9 6306 aa6.68□□□□□ -1.34
UPK3B-201ENST00000257632 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
UPK3B-201ENST00000257632 MT1LQ93083 61 aa6.66□□□□□ -1.34
UPK3B-201ENST00000257632 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
UPK3B-201ENST00000257632 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
UPK3B-201ENST00000257632 MT1MQ8N339 61 aa6.58□□□□□ -1.36
UPK3B-201ENST00000257632 DSTQ03001 7570 aaKnown RBP6.56□□□□□ -1.36
UPK3B-201ENST00000257632 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
UPK3B-201ENST00000257632 ROMO1P60602 79 aa6.45□□□□□ -1.38
UPK3B-201ENST00000257632 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
UPK3B-201ENST00000257632 KRTAP4-3Q9BYR4 195 aa6.42□□□□□ -1.38
UPK3B-201ENST00000257632 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
UPK3B-201ENST00000257632 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
UPK3B-201ENST00000257632 MT4P47944 62 aa6.32□□□□□ -1.4
UPK3B-201ENST00000257632 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
UPK3B-201ENST00000257632 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
UPK3B-201ENST00000257632 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
UPK3B-201ENST00000257632 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
UPK3B-201ENST00000257632 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
UPK3B-201ENST00000257632 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
UPK3B-201ENST00000257632 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
UPK3B-201ENST00000257632 KRTAP5-4Q6L8H1 288 aa6.11□□□□□ -1.43
UPK3B-201ENST00000257632 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
UPK3B-201ENST00000257632 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
UPK3B-201ENST00000257632 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
UPK3B-201ENST00000257632 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
UPK3B-201ENST00000257632 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
UPK3B-201ENST00000257632 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
UPK3B-201ENST00000257632 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
UPK3B-201ENST00000257632 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
UPK3B-201ENST00000257632 PRAC1Q96KF2 57 aa5.84□□□□□ -1.47
UPK3B-201ENST00000257632 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
UPK3B-201ENST00000257632 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
UPK3B-201ENST00000257632 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
UPK3B-201ENST00000257632 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
UPK3B-201ENST00000257632 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
UPK3B-201ENST00000257632 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
UPK3B-201ENST00000257632 MT1AP04731 61 aa5.68□□□□□ -1.5
UPK3B-201ENST00000257632 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
UPK3B-201ENST00000257632 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
UPK3B-201ENST00000257632 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
UPK3B-201ENST00000257632 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
UPK3B-201ENST00000257632 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
UPK3B-201ENST00000257632 MT3P25713 68 aa5.2□□□□□ -1.58
UPK3B-201ENST00000257632 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
UPK3B-201ENST00000257632 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
UPK3B-201ENST00000257632 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
UPK3B-201ENST00000257632 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
UPK3B-201ENST00000257632 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
UPK3B-201ENST00000257632 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
UPK3B-201ENST00000257632 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
UPK3B-201ENST00000257632 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
UPK3B-201ENST00000257632 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
UPK3B-201ENST00000257632 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
UPK3B-201ENST00000257632 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
UPK3B-201ENST00000257632 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
UPK3B-201ENST00000257632 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
UPK3B-201ENST00000257632 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
UPK3B-201ENST00000257632 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
UPK3B-201ENST00000257632 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
UPK3B-201ENST00000257632 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
UPK3B-201ENST00000257632 H3BS24 57 aa3.93□□□□□ -1.78
UPK3B-201ENST00000257632 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
UPK3B-201ENST00000257632 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
UPK3B-201ENST00000257632 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
UPK3B-201ENST00000257632 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
UPK3B-201ENST00000257632 INE1O15225 51 aa3.65□□□□□ -1.83
UPK3B-201ENST00000257632 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
UPK3B-201ENST00000257632 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
UPK3B-201ENST00000257632 PRM1P04553 51 aa3.32□□□□□ -1.88
UPK3B-201ENST00000257632 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
UPK3B-201ENST00000257632 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
UPK3B-201ENST00000257632 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 96.2 ms