RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
UBQLN1-201ENST00000257468 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
UBQLN1-201ENST00000257468 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
UBQLN1-201ENST00000257468 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
UBQLN1-201ENST00000257468 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
UBQLN1-201ENST00000257468 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
UBQLN1-201ENST00000257468 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
UBQLN1-201ENST00000257468 MT1MQ8N339 61 aa5.43□□□□□ -1.54
UBQLN1-201ENST00000257468 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
UBQLN1-201ENST00000257468 MT1GP13640 62 aa5.42□□□□□ -1.54
UBQLN1-201ENST00000257468 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
UBQLN1-201ENST00000257468 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
UBQLN1-201ENST00000257468 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
UBQLN1-201ENST00000257468 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
UBQLN1-201ENST00000257468 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
UBQLN1-201ENST00000257468 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
UBQLN1-201ENST00000257468 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
UBQLN1-201ENST00000257468 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
UBQLN1-201ENST00000257468 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
UBQLN1-201ENST00000257468 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
UBQLN1-201ENST00000257468 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
UBQLN1-201ENST00000257468 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
UBQLN1-201ENST00000257468 SPRR2EP22531 72 aa4.95□□□□□ -1.62
UBQLN1-201ENST00000257468 SPRR2BP35325 72 aa4.95□□□□□ -1.62
UBQLN1-201ENST00000257468 SPRR2AP35326 72 aa4.95□□□□□ -1.62
UBQLN1-201ENST00000257468 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
UBQLN1-201ENST00000257468 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
UBQLN1-201ENST00000257468 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
UBQLN1-201ENST00000257468 MT1AP04731 61 aa4.83□□□□□ -1.64
UBQLN1-201ENST00000257468 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
UBQLN1-201ENST00000257468 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
UBQLN1-201ENST00000257468 SPRR2DP22532 72 aa4.77□□□□□ -1.65
UBQLN1-201ENST00000257468 NEBP20929 6669 aa4.68□□□□□ -1.66
UBQLN1-201ENST00000257468 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
UBQLN1-201ENST00000257468 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
UBQLN1-201ENST00000257468 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
UBQLN1-201ENST00000257468 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
UBQLN1-201ENST00000257468 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
UBQLN1-201ENST00000257468 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
UBQLN1-201ENST00000257468 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
UBQLN1-201ENST00000257468 MT3P25713 68 aa4.33□□□□□ -1.72
UBQLN1-201ENST00000257468 PRM1P04553 51 aa4.29□□□□□ -1.72
UBQLN1-201ENST00000257468 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
UBQLN1-201ENST00000257468 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
UBQLN1-201ENST00000257468 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
UBQLN1-201ENST00000257468 MT4P47944 62 aa4.16□□□□□ -1.74
UBQLN1-201ENST00000257468 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
UBQLN1-201ENST00000257468 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
UBQLN1-201ENST00000257468 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
UBQLN1-201ENST00000257468 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
UBQLN1-201ENST00000257468 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
UBQLN1-201ENST00000257468 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
UBQLN1-201ENST00000257468 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
UBQLN1-201ENST00000257468 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
UBQLN1-201ENST00000257468 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
UBQLN1-201ENST00000257468 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
UBQLN1-201ENST00000257468 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
UBQLN1-201ENST00000257468 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
UBQLN1-201ENST00000257468 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
UBQLN1-201ENST00000257468 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
UBQLN1-201ENST00000257468 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
UBQLN1-201ENST00000257468 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
UBQLN1-201ENST00000257468 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
UBQLN1-201ENST00000257468 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
UBQLN1-201ENST00000257468 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
UBQLN1-201ENST00000257468 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
UBQLN1-201ENST00000257468 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
UBQLN1-201ENST00000257468 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
UBQLN1-201ENST00000257468 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
UBQLN1-201ENST00000257468 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
UBQLN1-201ENST00000257468 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
UBQLN1-201ENST00000257468 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
UBQLN1-201ENST00000257468 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
UBQLN1-201ENST00000257468 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
UBQLN1-201ENST00000257468 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
UBQLN1-201ENST00000257468 PHGR1C9JFL3 82 aa2.56□□□□□ -2
UBQLN1-201ENST00000257468 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms