RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 ATP5EP56381 51 aaPredicted RBP3.41□□□□□ -1.86
TMEM258-201ENST00000257262 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
TMEM258-201ENST00000257262 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
TMEM258-201ENST00000257262 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
TMEM258-201ENST00000257262 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
TMEM258-201ENST00000257262 TMEM258P61165 79 aa3.38□□□□□ -1.87
TMEM258-201ENST00000257262 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
TMEM258-201ENST00000257262 SPRR2EP22531 72 aa3.36□□□□□ -1.87
TMEM258-201ENST00000257262 SPRR2BP35325 72 aa3.36□□□□□ -1.87
TMEM258-201ENST00000257262 SPRR2AP35326 72 aa3.36□□□□□ -1.87
TMEM258-201ENST00000257262 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
TMEM258-201ENST00000257262 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
TMEM258-201ENST00000257262 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
TMEM258-201ENST00000257262 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
TMEM258-201ENST00000257262 A8MU10 97 aa3.32□□□□□ -1.88
TMEM258-201ENST00000257262 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
TMEM258-201ENST00000257262 K7ERS5 55 aa3.3□□□□□ -1.88
TMEM258-201ENST00000257262 SPRR2DP22532 72 aa3.25□□□□□ -1.89
TMEM258-201ENST00000257262 UQCR11O14957 56 aa3.23□□□□□ -1.89
TMEM258-201ENST00000257262 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
TMEM258-201ENST00000257262 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
TMEM258-201ENST00000257262 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
TMEM258-201ENST00000257262 A6NED7 52 aa3.19□□□□□ -1.9
TMEM258-201ENST00000257262 Q1T7F1 81 aa3.17□□□□□ -1.9
TMEM258-201ENST00000257262 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
TMEM258-201ENST00000257262 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
TMEM258-201ENST00000257262 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
TMEM258-201ENST00000257262 MT1EP04732 61 aa3.15□□□□□ -1.91
TMEM258-201ENST00000257262 TNP1P09430 55 aa3.15□□□□□ -1.91
TMEM258-201ENST00000257262 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
TMEM258-201ENST00000257262 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
TMEM258-201ENST00000257262 KRTAP19-3Q7Z4W3 81 aa3.11□□□□□ -1.91
TMEM258-201ENST00000257262 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
TMEM258-201ENST00000257262 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
TMEM258-201ENST00000257262 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
TMEM258-201ENST00000257262 MT1GP13640 62 aa3.05□□□□□ -1.92
TMEM258-201ENST00000257262 MT1LQ93083 61 aa3.03□□□□□ -1.92
TMEM258-201ENST00000257262 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
TMEM258-201ENST00000257262 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
TMEM258-201ENST00000257262 MT1MQ8N339 61 aa3□□□□□ -1.93
TMEM258-201ENST00000257262 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
TMEM258-201ENST00000257262 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
TMEM258-201ENST00000257262 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
TMEM258-201ENST00000257262 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
TMEM258-201ENST00000257262 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
TMEM258-201ENST00000257262 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
TMEM258-201ENST00000257262 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
TMEM258-201ENST00000257262 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
TMEM258-201ENST00000257262 MT4P47944 62 aa2.91□□□□□ -1.94
TMEM258-201ENST00000257262 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
TMEM258-201ENST00000257262 ROMO1P60602 79 aa2.89□□□□□ -1.95
TMEM258-201ENST00000257262 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
TMEM258-201ENST00000257262 BRK1Q8WUW1 75 aa2.89□□□□□ -1.95
TMEM258-201ENST00000257262 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
TMEM258-201ENST00000257262 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
TMEM258-201ENST00000257262 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
TMEM258-201ENST00000257262 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
TMEM258-201ENST00000257262 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
TMEM258-201ENST00000257262 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
TMEM258-201ENST00000257262 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
TMEM258-201ENST00000257262 MT1AP04731 61 aa2.58□□□□□ -2
TMEM258-201ENST00000257262 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
TMEM258-201ENST00000257262 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
TMEM258-201ENST00000257262 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
TMEM258-201ENST00000257262 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
TMEM258-201ENST00000257262 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
TMEM258-201ENST00000257262 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
TMEM258-201ENST00000257262 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
TMEM258-201ENST00000257262 INE1O15225 51 aa2.37□□□□□ -2.03
TMEM258-201ENST00000257262 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
TMEM258-201ENST00000257262 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
TMEM258-201ENST00000257262 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
TMEM258-201ENST00000257262 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
TMEM258-201ENST00000257262 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
TMEM258-201ENST00000257262 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
TMEM258-201ENST00000257262 PRM1P04553 51 aa1.49□□□□□ -2.17
TMEM258-201ENST00000257262 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
TMEM258-201ENST00000257262 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 26.2 ms