RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
H3F3B-201ENST00000254810 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
H3F3B-201ENST00000254810 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.71
H3F3B-201ENST00000254810 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
H3F3B-201ENST00000254810 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
H3F3B-201ENST00000254810 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.72
H3F3B-201ENST00000254810 MT1GP13640 62 aa4.34□□□□□ -1.72
H3F3B-201ENST00000254810 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
H3F3B-201ENST00000254810 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
H3F3B-201ENST00000254810 MT1MQ8N339 61 aa4.23□□□□□ -1.73
H3F3B-201ENST00000254810 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
H3F3B-201ENST00000254810 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
H3F3B-201ENST00000254810 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
H3F3B-201ENST00000254810 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
H3F3B-201ENST00000254810 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
H3F3B-201ENST00000254810 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
H3F3B-201ENST00000254810 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
H3F3B-201ENST00000254810 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
H3F3B-201ENST00000254810 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
H3F3B-201ENST00000254810 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
H3F3B-201ENST00000254810 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
H3F3B-201ENST00000254810 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
H3F3B-201ENST00000254810 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
H3F3B-201ENST00000254810 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
H3F3B-201ENST00000254810 MT1AP04731 61 aa3.86□□□□□ -1.79
H3F3B-201ENST00000254810 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
H3F3B-201ENST00000254810 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
H3F3B-201ENST00000254810 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
H3F3B-201ENST00000254810 PRM1P04553 51 aa3.76□□□□□ -1.81
H3F3B-201ENST00000254810 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
H3F3B-201ENST00000254810 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.82
H3F3B-201ENST00000254810 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
H3F3B-201ENST00000254810 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
H3F3B-201ENST00000254810 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
H3F3B-201ENST00000254810 NEBP20929 6669 aa3.56□□□□□ -1.84
H3F3B-201ENST00000254810 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
H3F3B-201ENST00000254810 SPRR2EP22531 72 aa3.51□□□□□ -1.85
H3F3B-201ENST00000254810 SPRR2BP35325 72 aa3.51□□□□□ -1.85
H3F3B-201ENST00000254810 SPRR2AP35326 72 aa3.51□□□□□ -1.85
H3F3B-201ENST00000254810 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
H3F3B-201ENST00000254810 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
H3F3B-201ENST00000254810 MT3P25713 68 aa3.36□□□□□ -1.87
H3F3B-201ENST00000254810 SPRR2DP22532 72 aa3.33□□□□□ -1.88
H3F3B-201ENST00000254810 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
H3F3B-201ENST00000254810 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
H3F3B-201ENST00000254810 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
H3F3B-201ENST00000254810 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
H3F3B-201ENST00000254810 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
H3F3B-201ENST00000254810 MT4P47944 62 aa3.02□□□□□ -1.93
H3F3B-201ENST00000254810 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
H3F3B-201ENST00000254810 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
H3F3B-201ENST00000254810 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
H3F3B-201ENST00000254810 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
H3F3B-201ENST00000254810 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
H3F3B-201ENST00000254810 LCE1DQ5T752 114 aa2.86□□□□□ -1.95
H3F3B-201ENST00000254810 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
H3F3B-201ENST00000254810 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
H3F3B-201ENST00000254810 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
H3F3B-201ENST00000254810 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
H3F3B-201ENST00000254810 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
H3F3B-201ENST00000254810 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
H3F3B-201ENST00000254810 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
H3F3B-201ENST00000254810 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
H3F3B-201ENST00000254810 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
H3F3B-201ENST00000254810 LCE1CQ5T751 118 aa2.55□□□□□ -2
H3F3B-201ENST00000254810 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
H3F3B-201ENST00000254810 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
H3F3B-201ENST00000254810 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
H3F3B-201ENST00000254810 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
H3F3B-201ENST00000254810 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
H3F3B-201ENST00000254810 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
H3F3B-201ENST00000254810 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
H3F3B-201ENST00000254810 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
H3F3B-201ENST00000254810 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
H3F3B-201ENST00000254810 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
H3F3B-201ENST00000254810 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
H3F3B-201ENST00000254810 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms