RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
MRPL35-201ENST00000254644 A0A1B0GU33 70 aa4.61□□□□□ -1.67
MRPL35-201ENST00000254644 MT4P47944 62 aa4.6□□□□□ -1.67
MRPL35-201ENST00000254644 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
MRPL35-201ENST00000254644 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
MRPL35-201ENST00000254644 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
MRPL35-201ENST00000254644 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
MRPL35-201ENST00000254644 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
MRPL35-201ENST00000254644 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
MRPL35-201ENST00000254644 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
MRPL35-201ENST00000254644 H7BZZ5 65 aa4.47□□□□□ -1.69
MRPL35-201ENST00000254644 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
MRPL35-201ENST00000254644 COX7CP15954 63 aa4.46□□□□□ -1.7
MRPL35-201ENST00000254644 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
MRPL35-201ENST00000254644 A8MU10 97 aa4.44□□□□□ -1.7
MRPL35-201ENST00000254644 TNP1P09430 55 aa4.44□□□□□ -1.7
MRPL35-201ENST00000254644 MT3P25713 68 aa4.44□□□□□ -1.7
MRPL35-201ENST00000254644 A0A1B0GU69 56 aa4.41□□□□□ -1.7
MRPL35-201ENST00000254644 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
MRPL35-201ENST00000254644 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
MRPL35-201ENST00000254644 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
MRPL35-201ENST00000254644 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
MRPL35-201ENST00000254644 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
MRPL35-201ENST00000254644 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
MRPL35-201ENST00000254644 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
MRPL35-201ENST00000254644 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
MRPL35-201ENST00000254644 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
MRPL35-201ENST00000254644 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
MRPL35-201ENST00000254644 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
MRPL35-201ENST00000254644 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
MRPL35-201ENST00000254644 CCDC179H3BU77 68 aa4.11□□□□□ -1.75
MRPL35-201ENST00000254644 ATP5EP56381 51 aaPredicted RBP4.11□□□□□ -1.75
MRPL35-201ENST00000254644 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
MRPL35-201ENST00000254644 UQCR11O14957 56 aa4.09□□□□□ -1.75
MRPL35-201ENST00000254644 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
MRPL35-201ENST00000254644 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
MRPL35-201ENST00000254644 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
MRPL35-201ENST00000254644 MT1AP04731 61 aa3.94□□□□□ -1.78
MRPL35-201ENST00000254644 TMEM258P61165 79 aa3.93□□□□□ -1.78
MRPL35-201ENST00000254644 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
MRPL35-201ENST00000254644 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
MRPL35-201ENST00000254644 K7ERS5 55 aa3.89□□□□□ -1.79
MRPL35-201ENST00000254644 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
MRPL35-201ENST00000254644 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
MRPL35-201ENST00000254644 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
MRPL35-201ENST00000254644 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
MRPL35-201ENST00000254644 PSPHP1O15172 72 aa3.76□□□□□ -1.81
MRPL35-201ENST00000254644 Q1T7F1 81 aa3.76□□□□□ -1.81
MRPL35-201ENST00000254644 V9GYY9 64 aa3.75□□□□□ -1.81
MRPL35-201ENST00000254644 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
MRPL35-201ENST00000254644 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
MRPL35-201ENST00000254644 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
MRPL35-201ENST00000254644 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
MRPL35-201ENST00000254644 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
MRPL35-201ENST00000254644 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
MRPL35-201ENST00000254644 ROMO1P60602 79 aa3.63□□□□□ -1.83
MRPL35-201ENST00000254644 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
MRPL35-201ENST00000254644 A6NED7 52 aa3.61□□□□□ -1.83
MRPL35-201ENST00000254644 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
MRPL35-201ENST00000254644 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
MRPL35-201ENST00000254644 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
MRPL35-201ENST00000254644 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
MRPL35-201ENST00000254644 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
MRPL35-201ENST00000254644 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
MRPL35-201ENST00000254644 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
MRPL35-201ENST00000254644 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
MRPL35-201ENST00000254644 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
MRPL35-201ENST00000254644 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
MRPL35-201ENST00000254644 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
MRPL35-201ENST00000254644 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
MRPL35-201ENST00000254644 PHGR1C9JFL3 82 aa2.58□□□□□ -2
MRPL35-201ENST00000254644 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
MRPL35-201ENST00000254644 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
MRPL35-201ENST00000254644 INE1O15225 51 aa2.31□□□□□ -2.04
MRPL35-201ENST00000254644 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
MRPL35-201ENST00000254644 PRM1P04553 51 aa1.84□□□□□ -2.11
MRPL35-201ENST00000254644 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms