RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
RARA-201ENST00000254066 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
RARA-201ENST00000254066 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
RARA-201ENST00000254066 KRTAP19-7Q3SYF9 63 aa6.92□□□□□ -1.3
RARA-201ENST00000254066 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
RARA-201ENST00000254066 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
RARA-201ENST00000254066 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
RARA-201ENST00000254066 KRTAP5-9P26371 169 aa6.82□□□□□ -1.32
RARA-201ENST00000254066 MT1LQ93083 61 aa6.79□□□□□ -1.32
RARA-201ENST00000254066 NEBP20929 6669 aa6.78□□□□□ -1.32
RARA-201ENST00000254066 MT1EP04732 61 aa6.69□□□□□ -1.34
RARA-201ENST00000254066 MUC12Q9UKN1 5478 aa6.68□□□□□ -1.34
RARA-201ENST00000254066 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
RARA-201ENST00000254066 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
RARA-201ENST00000254066 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
RARA-201ENST00000254066 KMT2DO14686 5537 aa6.58□□□□□ -1.36
RARA-201ENST00000254066 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
RARA-201ENST00000254066 SPRR2EP22531 72 aa6.49□□□□□ -1.37
RARA-201ENST00000254066 SPRR2BP35325 72 aa6.49□□□□□ -1.37
RARA-201ENST00000254066 SPRR2AP35326 72 aa6.49□□□□□ -1.37
RARA-201ENST00000254066 MDN1Q9NU22 5596 aa6.49□□□□□ -1.37
RARA-201ENST00000254066 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.39
RARA-201ENST00000254066 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
RARA-201ENST00000254066 MT1GP13640 62 aa6.31□□□□□ -1.4
RARA-201ENST00000254066 SPRR2DP22532 72 aa6.29□□□□□ -1.4
RARA-201ENST00000254066 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
RARA-201ENST00000254066 MT1MQ8N339 61 aa6.2□□□□□ -1.42
RARA-201ENST00000254066 MT1AP04731 61 aa6.17□□□□□ -1.42
RARA-201ENST00000254066 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
RARA-201ENST00000254066 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
RARA-201ENST00000254066 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
RARA-201ENST00000254066 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
RARA-201ENST00000254066 LCE3DQ9BYE3 92 aa5.95□□□□□ -1.46
RARA-201ENST00000254066 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
RARA-201ENST00000254066 PRM1P04553 51 aa5.9□□□□□ -1.46
RARA-201ENST00000254066 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.47
RARA-201ENST00000254066 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.47
RARA-201ENST00000254066 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
RARA-201ENST00000254066 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
RARA-201ENST00000254066 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
RARA-201ENST00000254066 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
RARA-201ENST00000254066 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
RARA-201ENST00000254066 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
RARA-201ENST00000254066 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
RARA-201ENST00000254066 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
RARA-201ENST00000254066 MT4P47944 62 aa5.45□□□□□ -1.54
RARA-201ENST00000254066 LCE1FQ5T754 118 aa5.42□□□□□ -1.54
RARA-201ENST00000254066 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
RARA-201ENST00000254066 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
RARA-201ENST00000254066 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
RARA-201ENST00000254066 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
RARA-201ENST00000254066 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
RARA-201ENST00000254066 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
RARA-201ENST00000254066 MT3P25713 68 aa5.12□□□□□ -1.59
RARA-201ENST00000254066 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
RARA-201ENST00000254066 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
RARA-201ENST00000254066 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
RARA-201ENST00000254066 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
RARA-201ENST00000254066 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
RARA-201ENST00000254066 KRTAP5-8O75690 187 aa4.54□□□□□ -1.68
RARA-201ENST00000254066 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
RARA-201ENST00000254066 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
RARA-201ENST00000254066 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
RARA-201ENST00000254066 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
RARA-201ENST00000254066 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
RARA-201ENST00000254066 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
RARA-201ENST00000254066 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
RARA-201ENST00000254066 KRTAP21-1Q3LI58 79 aa3.91□□□□□ -1.78
RARA-201ENST00000254066 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
RARA-201ENST00000254066 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
RARA-201ENST00000254066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
RARA-201ENST00000254066 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
RARA-201ENST00000254066 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
RARA-201ENST00000254066 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
RARA-201ENST00000254066 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
RARA-201ENST00000254066 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
RARA-201ENST00000254066 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 70.8 ms