RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
GSE1-201ENST00000253458 MT1EP04732 61 aa4.03□□□□□ -1.76
GSE1-201ENST00000253458 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
GSE1-201ENST00000253458 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.77
GSE1-201ENST00000253458 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
GSE1-201ENST00000253458 HERC2O95714 4834 aa4□□□□□ -1.77
GSE1-201ENST00000253458 MT1MQ8N339 61 aa3.97□□□□□ -1.77
GSE1-201ENST00000253458 MT3P25713 68 aa3.94□□□□□ -1.78
GSE1-201ENST00000253458 KMT2CQ8NEZ4 4911 aaKnown RBP3.91□□□□□ -1.78
GSE1-201ENST00000253458 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
GSE1-201ENST00000253458 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
GSE1-201ENST00000253458 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
GSE1-201ENST00000253458 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
GSE1-201ENST00000253458 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
GSE1-201ENST00000253458 RYR2Q92736 4967 aa3.82□□□□□ -1.8
GSE1-201ENST00000253458 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
GSE1-201ENST00000253458 HERC1Q15751 4861 aa3.75□□□□□ -1.81
GSE1-201ENST00000253458 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
GSE1-201ENST00000253458 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.82
GSE1-201ENST00000253458 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
GSE1-201ENST00000253458 MUC2Q02817 5179 aa3.65□□□□□ -1.83
GSE1-201ENST00000253458 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
GSE1-201ENST00000253458 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
GSE1-201ENST00000253458 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
GSE1-201ENST00000253458 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
GSE1-201ENST00000253458 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
GSE1-201ENST00000253458 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
GSE1-201ENST00000253458 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
GSE1-201ENST00000253458 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
GSE1-201ENST00000253458 MT1AP04731 61 aa3.55□□□□□ -1.84
GSE1-201ENST00000253458 FAT4Q6V0I7 4981 aa3.48□□□□□ -1.85
GSE1-201ENST00000253458 UBR4Q5T4S7 5183 aa3.46□□□□□ -1.86
GSE1-201ENST00000253458 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
GSE1-201ENST00000253458 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
GSE1-201ENST00000253458 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
GSE1-201ENST00000253458 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
GSE1-201ENST00000253458 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
GSE1-201ENST00000253458 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
GSE1-201ENST00000253458 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
GSE1-201ENST00000253458 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
GSE1-201ENST00000253458 KMT2DO14686 5537 aa3.31□□□□□ -1.88
GSE1-201ENST00000253458 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
GSE1-201ENST00000253458 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
GSE1-201ENST00000253458 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
GSE1-201ENST00000253458 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
GSE1-201ENST00000253458 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
GSE1-201ENST00000253458 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
GSE1-201ENST00000253458 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
GSE1-201ENST00000253458 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
GSE1-201ENST00000253458 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
GSE1-201ENST00000253458 USH2AO75445 5202 aa2.96□□□□□ -1.93
GSE1-201ENST00000253458 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
GSE1-201ENST00000253458 NEBP20929 6669 aa2.84□□□□□ -1.95
GSE1-201ENST00000253458 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
GSE1-201ENST00000253458 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
GSE1-201ENST00000253458 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
GSE1-201ENST00000253458 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
GSE1-201ENST00000253458 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
GSE1-201ENST00000253458 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
GSE1-201ENST00000253458 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
GSE1-201ENST00000253458 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
GSE1-201ENST00000253458 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
GSE1-201ENST00000253458 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
GSE1-201ENST00000253458 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
GSE1-201ENST00000253458 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
GSE1-201ENST00000253458 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
GSE1-201ENST00000253458 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.12
GSE1-201ENST00000253458 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
GSE1-201ENST00000253458 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
GSE1-201ENST00000253458 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
GSE1-201ENST00000253458 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
GSE1-201ENST00000253458 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
GSE1-201ENST00000253458 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
GSE1-201ENST00000253458 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
GSE1-201ENST00000253458 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
GSE1-201ENST00000253458 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
GSE1-201ENST00000253458 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms