RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 H0YAA0 97 aa1.67□□□□□ -2.14
RBM39-201ENST00000253363 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
RBM39-201ENST00000253363 PP632Q6XCG6 107 aa1.67□□□□□ -2.14
RBM39-201ENST00000253363 FLGP20930 4061 aaPredicted RBP1.67□□□□□ -2.14
RBM39-201ENST00000253363 KRTAP9-6A8MVA2 160 aa1.65□□□□□ -2.14
RBM39-201ENST00000253363 MT1FP04733 61 aa1.65□□□□□ -2.14
RBM39-201ENST00000253363 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.14
RBM39-201ENST00000253363 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.14
RBM39-201ENST00000253363 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
RBM39-201ENST00000253363 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
RBM39-201ENST00000253363 SPRR2GQ9BYE4 73 aa1.62□□□□□ -2.15
RBM39-201ENST00000253363 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
RBM39-201ENST00000253363 KRTAP19-8Q3LI54 63 aa1.61□□□□□ -2.15
RBM39-201ENST00000253363 SPRR5A0A1B0GTR4 108 aa1.6□□□□□ -2.15
RBM39-201ENST00000253363 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
RBM39-201ENST00000253363 KRTAP13-4Q3LI77 160 aa1.6□□□□□ -2.15
RBM39-201ENST00000253363 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
RBM39-201ENST00000253363 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
RBM39-201ENST00000253363 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
RBM39-201ENST00000253363 MT1BP07438 61 aa1.54□□□□□ -2.16
RBM39-201ENST00000253363 M0QZ58 72 aa1.53□□□□□ -2.16
RBM39-201ENST00000253363 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
RBM39-201ENST00000253363 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
RBM39-201ENST00000253363 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
RBM39-201ENST00000253363 KRTAP4-3Q9BYR4 195 aa1.5□□□□□ -2.17
RBM39-201ENST00000253363 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
RBM39-201ENST00000253363 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
RBM39-201ENST00000253363 USH2AO75445 5202 aa1.49□□□□□ -2.17
RBM39-201ENST00000253363 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
RBM39-201ENST00000253363 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
RBM39-201ENST00000253363 NEBP20929 6669 aa1.46□□□□□ -2.18
RBM39-201ENST00000253363 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
RBM39-201ENST00000253363 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
RBM39-201ENST00000253363 MT1XP80297 61 aa1.44□□□□□ -2.18
RBM39-201ENST00000253363 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
RBM39-201ENST00000253363 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
RBM39-201ENST00000253363 SPRR2EP22531 72 aa1.4□□□□□ -2.19
RBM39-201ENST00000253363 SPRR2BP35325 72 aa1.4□□□□□ -2.19
RBM39-201ENST00000253363 SPRR2AP35326 72 aa1.4□□□□□ -2.19
RBM39-201ENST00000253363 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
RBM39-201ENST00000253363 SPRR2DP22532 72 aa1.37□□□□□ -2.19
RBM39-201ENST00000253363 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
RBM39-201ENST00000253363 TNP1P09430 55 aa1.34□□□□□ -2.19
RBM39-201ENST00000253363 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.19
RBM39-201ENST00000253363 OBSCNQ5VST9 7968 aa1.34□□□□□ -2.2
RBM39-201ENST00000253363 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
RBM39-201ENST00000253363 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
RBM39-201ENST00000253363 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
RBM39-201ENST00000253363 A0A0D9SG42 100 aa1.31□□□□□ -2.2
RBM39-201ENST00000253363 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
RBM39-201ENST00000253363 MT1EP04732 61 aa1.3□□□□□ -2.2
RBM39-201ENST00000253363 MT1GP13640 62 aa1.3□□□□□ -2.2
RBM39-201ENST00000253363 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
RBM39-201ENST00000253363 KRTAP19-7Q3SYF9 63 aa1.28□□□□□ -2.2
RBM39-201ENST00000253363 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
RBM39-201ENST00000253363 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
RBM39-201ENST00000253363 MT1LQ93083 61 aa1.24□□□□□ -2.21
RBM39-201ENST00000253363 MT1MQ8N339 61 aa1.24□□□□□ -2.21
RBM39-201ENST00000253363 KMT2DO14686 5537 aa1.23□□□□□ -2.21
RBM39-201ENST00000253363 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
RBM39-201ENST00000253363 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
RBM39-201ENST00000253363 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
RBM39-201ENST00000253363 LCE1BQ5T7P3 118 aa1.16□□□□□ -2.22
RBM39-201ENST00000253363 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
RBM39-201ENST00000253363 MT4P47944 62 aa1.11□□□□□ -2.23
RBM39-201ENST00000253363 MT1AP04731 61 aa1.1□□□□□ -2.23
RBM39-201ENST00000253363 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
RBM39-201ENST00000253363 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
RBM39-201ENST00000253363 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.24
RBM39-201ENST00000253363 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
RBM39-201ENST00000253363 KRTAP6-2Q3LI66 62 aa0.96□□□□□ -2.26
RBM39-201ENST00000253363 PRM1P04553 51 aa0.94□□□□□ -2.26
RBM39-201ENST00000253363 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
RBM39-201ENST00000253363 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
RBM39-201ENST00000253363 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
RBM39-201ENST00000253363 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
RBM39-201ENST00000253363 MUC16Q8WXI7 14507 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms