RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 SPRR2DP22532 72 aa8.23□□□□□ -1.09
APOE-201ENST00000252486 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
APOE-201ENST00000252486 KRTAP2-3P0C7H8 128 aa8.21□□□□□ -1.1
APOE-201ENST00000252486 KRTAP2-4Q9BYR9 128 aa8.21□□□□□ -1.1
APOE-201ENST00000252486 LCE5AQ5TCM9 118 aa8.19□□□□□ -1.1
APOE-201ENST00000252486 MT1GP13640 62 aa8.15□□□□□ -1.1
APOE-201ENST00000252486 MT1LQ93083 61 aa8.15□□□□□ -1.1
APOE-201ENST00000252486 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
APOE-201ENST00000252486 MT1MQ8N339 61 aa7.98□□□□□ -1.13
APOE-201ENST00000252486 PRO0628Q9UI54 55 aa7.98□□□□□ -1.13
APOE-201ENST00000252486 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
APOE-201ENST00000252486 KRTAP19-4Q3LI73 84 aa7.94□□□□□ -1.14
APOE-201ENST00000252486 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
APOE-201ENST00000252486 KRTAP2-2Q9BYT5 123 aa7.92□□□□□ -1.14
APOE-201ENST00000252486 KRTAP2-1Q9BYU5 128 aa7.92□□□□□ -1.14
APOE-201ENST00000252486 DSTQ03001 7570 aaKnown RBP7.74□□□□□ -1.17
APOE-201ENST00000252486 KRTAP4-7Q9BYR0 210 aa7.72□□□□□ -1.17
APOE-201ENST00000252486 KRTAP4-3Q9BYR4 195 aa7.71□□□□□ -1.18
APOE-201ENST00000252486 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
APOE-201ENST00000252486 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
APOE-201ENST00000252486 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
APOE-201ENST00000252486 GPR98Q8WXG9 6306 aa7.42□□□□□ -1.22
APOE-201ENST00000252486 LCE4AQ5TA78 99 aa7.35□□□□□ -1.23
APOE-201ENST00000252486 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
APOE-201ENST00000252486 KRTAP5-4Q6L8H1 288 aa7.28□□□□□ -1.24
APOE-201ENST00000252486 KRTAP5-5Q701N2 237 aaPredicted RBP7.26□□□□□ -1.25
APOE-201ENST00000252486 KRTAP4-9Q9BYQ8 210 aa7.22□□□□□ -1.25
APOE-201ENST00000252486 KRTAP9-6A8MVA2 160 aa7.15□□□□□ -1.26
APOE-201ENST00000252486 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
APOE-201ENST00000252486 MT4P47944 62 aa7.11□□□□□ -1.27
APOE-201ENST00000252486 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
APOE-201ENST00000252486 KRTAP12-4P60329 112 aa6.99□□□□□ -1.29
APOE-201ENST00000252486 MT1AP04731 61 aa6.96□□□□□ -1.3
APOE-201ENST00000252486 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
APOE-201ENST00000252486 HMCN1Q96RW7 5635 aa6.95□□□□□ -1.3
APOE-201ENST00000252486 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
APOE-201ENST00000252486 AHNAK2Q8IVF2 5795 aa6.86□□□□□ -1.31
APOE-201ENST00000252486 KRTAP6-1Q3LI64 71 aa6.85□□□□□ -1.31
APOE-201ENST00000252486 KRTAP20-2Q3LI61 65 aa6.83□□□□□ -1.32
APOE-201ENST00000252486 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
APOE-201ENST00000252486 KRTAP5-10Q6L8G5 202 aa6.75□□□□□ -1.33
APOE-201ENST00000252486 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
APOE-201ENST00000252486 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
APOE-201ENST00000252486 KRTAP5-7Q6L8G8 165 aa6.53□□□□□ -1.36
APOE-201ENST00000252486 KRTAP5-2Q701N4 177 aa6.48□□□□□ -1.37
APOE-201ENST00000252486 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
APOE-201ENST00000252486 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
APOE-201ENST00000252486 MT3P25713 68 aa6.37□□□□□ -1.39
APOE-201ENST00000252486 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
APOE-201ENST00000252486 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
APOE-201ENST00000252486 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
APOE-201ENST00000252486 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
APOE-201ENST00000252486 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
APOE-201ENST00000252486 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
APOE-201ENST00000252486 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
APOE-201ENST00000252486 MUC5BQ9HC84 5762 aaPredicted RBP5.69□□□□□ -1.5
APOE-201ENST00000252486 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
APOE-201ENST00000252486 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
APOE-201ENST00000252486 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
APOE-201ENST00000252486 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
APOE-201ENST00000252486 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
APOE-201ENST00000252486 LCE1CQ5T751 118 aa5.29□□□□□ -1.56
APOE-201ENST00000252486 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
APOE-201ENST00000252486 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
APOE-201ENST00000252486 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
APOE-201ENST00000252486 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
APOE-201ENST00000252486 INE1O15225 51 aa4.71□□□□□ -1.66
APOE-201ENST00000252486 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
APOE-201ENST00000252486 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
APOE-201ENST00000252486 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
APOE-201ENST00000252486 PRM1P04553 51 aa4.36□□□□□ -1.71
APOE-201ENST00000252486 PHGR1C9JFL3 82 aa4.06□□□□□ -1.76
APOE-201ENST00000252486 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
APOE-201ENST00000252486 H3BS24 57 aa3.63□□□□□ -1.83
APOE-201ENST00000252486 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
APOE-201ENST00000252486 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
APOE-201ENST00000252486 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms