RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
LSM8-201ENST00000249299 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
LSM8-201ENST00000249299 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
LSM8-201ENST00000249299 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
LSM8-201ENST00000249299 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
LSM8-201ENST00000249299 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
LSM8-201ENST00000249299 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
LSM8-201ENST00000249299 MT3P25713 68 aa4.97□□□□□ -1.61
LSM8-201ENST00000249299 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
LSM8-201ENST00000249299 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
LSM8-201ENST00000249299 KMT2DO14686 5537 aa4.86□□□□□ -1.63
LSM8-201ENST00000249299 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
LSM8-201ENST00000249299 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
LSM8-201ENST00000249299 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
LSM8-201ENST00000249299 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
LSM8-201ENST00000249299 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
LSM8-201ENST00000249299 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
LSM8-201ENST00000249299 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
LSM8-201ENST00000249299 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
LSM8-201ENST00000249299 MT1EP04732 61 aa4.74□□□□□ -1.65
LSM8-201ENST00000249299 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
LSM8-201ENST00000249299 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
LSM8-201ENST00000249299 MT1LQ93083 61 aa4.62□□□□□ -1.67
LSM8-201ENST00000249299 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
LSM8-201ENST00000249299 MT1GP13640 62 aa4.6□□□□□ -1.67
LSM8-201ENST00000249299 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
LSM8-201ENST00000249299 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
LSM8-201ENST00000249299 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
LSM8-201ENST00000249299 SPRR2EP22531 72 aa4.54□□□□□ -1.68
LSM8-201ENST00000249299 SPRR2BP35325 72 aa4.54□□□□□ -1.68
LSM8-201ENST00000249299 SPRR2AP35326 72 aa4.54□□□□□ -1.68
LSM8-201ENST00000249299 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
LSM8-201ENST00000249299 NEBP20929 6669 aa4.49□□□□□ -1.69
LSM8-201ENST00000249299 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
LSM8-201ENST00000249299 MT1MQ8N339 61 aa4.46□□□□□ -1.69
LSM8-201ENST00000249299 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
LSM8-201ENST00000249299 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
LSM8-201ENST00000249299 SPRR2DP22532 72 aa4.39□□□□□ -1.71
LSM8-201ENST00000249299 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
LSM8-201ENST00000249299 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
LSM8-201ENST00000249299 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
LSM8-201ENST00000249299 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
LSM8-201ENST00000249299 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
LSM8-201ENST00000249299 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
LSM8-201ENST00000249299 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
LSM8-201ENST00000249299 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
LSM8-201ENST00000249299 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
LSM8-201ENST00000249299 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
LSM8-201ENST00000249299 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
LSM8-201ENST00000249299 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
LSM8-201ENST00000249299 MT1AP04731 61 aa3.95□□□□□ -1.78
LSM8-201ENST00000249299 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
LSM8-201ENST00000249299 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
LSM8-201ENST00000249299 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
LSM8-201ENST00000249299 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
LSM8-201ENST00000249299 MT4P47944 62 aa3.75□□□□□ -1.81
LSM8-201ENST00000249299 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
LSM8-201ENST00000249299 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
LSM8-201ENST00000249299 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
LSM8-201ENST00000249299 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
LSM8-201ENST00000249299 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
LSM8-201ENST00000249299 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
LSM8-201ENST00000249299 INE1O15225 51 aa3.32□□□□□ -1.88
LSM8-201ENST00000249299 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
LSM8-201ENST00000249299 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
LSM8-201ENST00000249299 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
LSM8-201ENST00000249299 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
LSM8-201ENST00000249299 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
LSM8-201ENST00000249299 MUC5ACP98088 5654 aa3□□□□□ -1.93
LSM8-201ENST00000249299 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
LSM8-201ENST00000249299 PRM1P04553 51 aa2.68□□□□□ -1.98
LSM8-201ENST00000249299 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
LSM8-201ENST00000249299 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
LSM8-201ENST00000249299 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
LSM8-201ENST00000249299 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
LSM8-201ENST00000249299 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
LSM8-201ENST00000249299 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms