RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.34
CACTIN-202ENST00000248420 KRTAP4-3Q9BYR4 195 aa6.7□□□□□ -1.34
CACTIN-202ENST00000248420 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
CACTIN-202ENST00000248420 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
CACTIN-202ENST00000248420 MT1GP13640 62 aa6.57□□□□□ -1.36
CACTIN-202ENST00000248420 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
CACTIN-202ENST00000248420 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
CACTIN-202ENST00000248420 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
CACTIN-202ENST00000248420 MT1MQ8N339 61 aa6.35□□□□□ -1.39
CACTIN-202ENST00000248420 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
CACTIN-202ENST00000248420 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
CACTIN-202ENST00000248420 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
CACTIN-202ENST00000248420 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
CACTIN-202ENST00000248420 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
CACTIN-202ENST00000248420 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
CACTIN-202ENST00000248420 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
CACTIN-202ENST00000248420 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
CACTIN-202ENST00000248420 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
CACTIN-202ENST00000248420 MDN1Q9NU22 5596 aa6□□□□□ -1.45
CACTIN-202ENST00000248420 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
CACTIN-202ENST00000248420 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
CACTIN-202ENST00000248420 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
CACTIN-202ENST00000248420 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
CACTIN-202ENST00000248420 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
CACTIN-202ENST00000248420 MT1AP04731 61 aa5.72□□□□□ -1.49
CACTIN-202ENST00000248420 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
CACTIN-202ENST00000248420 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
CACTIN-202ENST00000248420 PRM1P04553 51 aa5.64□□□□□ -1.51
CACTIN-202ENST00000248420 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
CACTIN-202ENST00000248420 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
CACTIN-202ENST00000248420 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
CACTIN-202ENST00000248420 SPRR2EP22531 72 aa5.39□□□□□ -1.55
CACTIN-202ENST00000248420 SPRR2BP35325 72 aa5.39□□□□□ -1.55
CACTIN-202ENST00000248420 SPRR2AP35326 72 aa5.39□□□□□ -1.55
CACTIN-202ENST00000248420 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
CACTIN-202ENST00000248420 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
CACTIN-202ENST00000248420 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
CACTIN-202ENST00000248420 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
CACTIN-202ENST00000248420 SPRR2DP22532 72 aa5.12□□□□□ -1.59
CACTIN-202ENST00000248420 MT3P25713 68 aa5.08□□□□□ -1.6
CACTIN-202ENST00000248420 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
CACTIN-202ENST00000248420 NEBP20929 6669 aa4.8□□□□□ -1.64
CACTIN-202ENST00000248420 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
CACTIN-202ENST00000248420 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.65
CACTIN-202ENST00000248420 MT4P47944 62 aa4.69□□□□□ -1.66
CACTIN-202ENST00000248420 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
CACTIN-202ENST00000248420 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
CACTIN-202ENST00000248420 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
CACTIN-202ENST00000248420 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
CACTIN-202ENST00000248420 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
CACTIN-202ENST00000248420 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
CACTIN-202ENST00000248420 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
CACTIN-202ENST00000248420 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
CACTIN-202ENST00000248420 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
CACTIN-202ENST00000248420 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
CACTIN-202ENST00000248420 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
CACTIN-202ENST00000248420 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
CACTIN-202ENST00000248420 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
CACTIN-202ENST00000248420 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
CACTIN-202ENST00000248420 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CACTIN-202ENST00000248420 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
CACTIN-202ENST00000248420 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CACTIN-202ENST00000248420 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
CACTIN-202ENST00000248420 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
CACTIN-202ENST00000248420 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
CACTIN-202ENST00000248420 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
CACTIN-202ENST00000248420 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
CACTIN-202ENST00000248420 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
CACTIN-202ENST00000248420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
CACTIN-202ENST00000248420 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
CACTIN-202ENST00000248420 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
CACTIN-202ENST00000248420 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.88
CACTIN-202ENST00000248420 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CACTIN-202ENST00000248420 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CACTIN-202ENST00000248420 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
CACTIN-202ENST00000248420 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
CACTIN-202ENST00000248420 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms