RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
SH2D3A-201ENST00000245908 KRTAP19-3Q7Z4W3 81 aa7.06□□□□□ -1.28
SH2D3A-201ENST00000245908 KRTAP4-3Q9BYR4 195 aa7.06□□□□□ -1.28
SH2D3A-201ENST00000245908 MT1MQ8N339 61 aa7.05□□□□□ -1.28
SH2D3A-201ENST00000245908 MT1GP13640 62 aa7.04□□□□□ -1.28
SH2D3A-201ENST00000245908 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.29
SH2D3A-201ENST00000245908 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
SH2D3A-201ENST00000245908 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
SH2D3A-201ENST00000245908 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
SH2D3A-201ENST00000245908 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
SH2D3A-201ENST00000245908 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
SH2D3A-201ENST00000245908 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
SH2D3A-201ENST00000245908 KRTAP12-4P60329 112 aa6.59□□□□□ -1.36
SH2D3A-201ENST00000245908 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
SH2D3A-201ENST00000245908 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
SH2D3A-201ENST00000245908 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
SH2D3A-201ENST00000245908 KRTAP9-6A0A140TA67 174 aa6.39□□□□□ -1.39
SH2D3A-201ENST00000245908 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
SH2D3A-201ENST00000245908 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
SH2D3A-201ENST00000245908 KRTAP6-1Q3LI64 71 aa6.37□□□□□ -1.39
SH2D3A-201ENST00000245908 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
SH2D3A-201ENST00000245908 MT1AP04731 61 aa6.34□□□□□ -1.39
SH2D3A-201ENST00000245908 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
SH2D3A-201ENST00000245908 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
SH2D3A-201ENST00000245908 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
SH2D3A-201ENST00000245908 SPRR2EP22531 72 aa6.2□□□□□ -1.42
SH2D3A-201ENST00000245908 SPRR2BP35325 72 aa6.2□□□□□ -1.42
SH2D3A-201ENST00000245908 SPRR2AP35326 72 aa6.2□□□□□ -1.42
SH2D3A-201ENST00000245908 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
SH2D3A-201ENST00000245908 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
SH2D3A-201ENST00000245908 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
SH2D3A-201ENST00000245908 LCE3EQ5T5B0 92 aa6□□□□□ -1.45
SH2D3A-201ENST00000245908 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
SH2D3A-201ENST00000245908 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
SH2D3A-201ENST00000245908 SPRR2DP22532 72 aa5.94□□□□□ -1.46
SH2D3A-201ENST00000245908 PRM1P04553 51 aa5.9□□□□□ -1.47
SH2D3A-201ENST00000245908 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
SH2D3A-201ENST00000245908 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
SH2D3A-201ENST00000245908 MT3P25713 68 aa5.69□□□□□ -1.5
SH2D3A-201ENST00000245908 NEBP20929 6669 aa5.64□□□□□ -1.51
SH2D3A-201ENST00000245908 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
SH2D3A-201ENST00000245908 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
SH2D3A-201ENST00000245908 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
SH2D3A-201ENST00000245908 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
SH2D3A-201ENST00000245908 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
SH2D3A-201ENST00000245908 MT4P47944 62 aa5.19□□□□□ -1.58
SH2D3A-201ENST00000245908 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
SH2D3A-201ENST00000245908 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
SH2D3A-201ENST00000245908 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
SH2D3A-201ENST00000245908 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
SH2D3A-201ENST00000245908 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
SH2D3A-201ENST00000245908 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SH2D3A-201ENST00000245908 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
SH2D3A-201ENST00000245908 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
SH2D3A-201ENST00000245908 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
SH2D3A-201ENST00000245908 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
SH2D3A-201ENST00000245908 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
SH2D3A-201ENST00000245908 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
SH2D3A-201ENST00000245908 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
SH2D3A-201ENST00000245908 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SH2D3A-201ENST00000245908 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
SH2D3A-201ENST00000245908 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
SH2D3A-201ENST00000245908 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
SH2D3A-201ENST00000245908 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
SH2D3A-201ENST00000245908 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
SH2D3A-201ENST00000245908 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
SH2D3A-201ENST00000245908 KRTAP21-1Q3LI58 79 aa3.82□□□□□ -1.8
SH2D3A-201ENST00000245908 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
SH2D3A-201ENST00000245908 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SH2D3A-201ENST00000245908 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SH2D3A-201ENST00000245908 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
SH2D3A-201ENST00000245908 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
SH2D3A-201ENST00000245908 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
SH2D3A-201ENST00000245908 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
SH2D3A-201ENST00000245908 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
SH2D3A-201ENST00000245908 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
SH2D3A-201ENST00000245908 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 201.5 ms