RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
SSR1-201ENST00000244763 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
SSR1-201ENST00000244763 PRM1P04553 51 aa2.16□□□□□ -2.06
SSR1-201ENST00000244763 MT1AP04731 61 aa2.16□□□□□ -2.06
SSR1-201ENST00000244763 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
SSR1-201ENST00000244763 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
SSR1-201ENST00000244763 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
SSR1-201ENST00000244763 LCE4AQ5TA78 99 aa2.12□□□□□ -2.07
SSR1-201ENST00000244763 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
SSR1-201ENST00000244763 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
SSR1-201ENST00000244763 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
SSR1-201ENST00000244763 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
SSR1-201ENST00000244763 KMT2CQ8NEZ4 4911 aaKnown RBP2.1□□□□□ -2.07
SSR1-201ENST00000244763 LOC100996750A0A140TA64 210 aa2.1□□□□□ -2.07
SSR1-201ENST00000244763 KRTAP19-7Q3SYF9 63 aa2.1□□□□□ -2.07
SSR1-201ENST00000244763 HYDINQ4G0P3 5121 aa2.09□□□□□ -2.07
SSR1-201ENST00000244763 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
SSR1-201ENST00000244763 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
SSR1-201ENST00000244763 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
SSR1-201ENST00000244763 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
SSR1-201ENST00000244763 HMCN2Q8NDA2 5059 aa2.04□□□□□ -2.08
SSR1-201ENST00000244763 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
SSR1-201ENST00000244763 KRTAP9-4Q9BYQ2 154 aa2.01□□□□□ -2.09
SSR1-201ENST00000244763 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
SSR1-201ENST00000244763 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.98□□□□□ -2.09
SSR1-201ENST00000244763 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SSR1-201ENST00000244763 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
SSR1-201ENST00000244763 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
SSR1-201ENST00000244763 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
SSR1-201ENST00000244763 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
SSR1-201ENST00000244763 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
SSR1-201ENST00000244763 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
SSR1-201ENST00000244763 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
SSR1-201ENST00000244763 FAT4Q6V0I7 4981 aa1.89□□□□□ -2.11
SSR1-201ENST00000244763 KRTAP9-9Q9BYP9 154 aa1.85□□□□□ -2.11
SSR1-201ENST00000244763 KRTAP4-6Q9BYQ5 205 aa1.83□□□□□ -2.12
SSR1-201ENST00000244763 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
SSR1-201ENST00000244763 ABCA13Q86UQ4 5058 aa1.81□□□□□ -2.12
SSR1-201ENST00000244763 KRTAP9-6A8MVA2 160 aa1.8□□□□□ -2.12
SSR1-201ENST00000244763 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
SSR1-201ENST00000244763 RNF213Q63HN8 5207 aa1.78□□□□□ -2.13
SSR1-201ENST00000244763 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
SSR1-201ENST00000244763 MUC2Q02817 5179 aa1.75□□□□□ -2.13
SSR1-201ENST00000244763 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
SSR1-201ENST00000244763 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
SSR1-201ENST00000244763 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
SSR1-201ENST00000244763 NEBP20929 6669 aa1.61□□□□□ -2.15
SSR1-201ENST00000244763 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
SSR1-201ENST00000244763 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
SSR1-201ENST00000244763 KRTAP4-11Q9BYQ6 195 aa1.56□□□□□ -2.16
SSR1-201ENST00000244763 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
SSR1-201ENST00000244763 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
SSR1-201ENST00000244763 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
SSR1-201ENST00000244763 KMT2DO14686 5537 aa1.46□□□□□ -2.18
SSR1-201ENST00000244763 USH2AO75445 5202 aa1.45□□□□□ -2.18
SSR1-201ENST00000244763 KRTAP4-2Q9BYR5 136 aa1.41□□□□□ -2.18
SSR1-201ENST00000244763 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
SSR1-201ENST00000244763 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
SSR1-201ENST00000244763 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
SSR1-201ENST00000244763 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
SSR1-201ENST00000244763 KRTAP5-3Q6L8H2 238 aa1.36□□□□□ -2.19
SSR1-201ENST00000244763 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
SSR1-201ENST00000244763 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
SSR1-201ENST00000244763 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
SSR1-201ENST00000244763 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
SSR1-201ENST00000244763 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
SSR1-201ENST00000244763 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
SSR1-201ENST00000244763 KRTAP5-2Q701N4 177 aa1.16□□□□□ -2.22
SSR1-201ENST00000244763 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
SSR1-201ENST00000244763 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
SSR1-201ENST00000244763 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
SSR1-201ENST00000244763 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
SSR1-201ENST00000244763 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.97□□□□□ -2.25
SSR1-201ENST00000244763 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
SSR1-201ENST00000244763 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
SSR1-201ENST00000244763 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SSR1-201ENST00000244763 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 129.2 ms