RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 KRTAP2-1Q9BYU5 128 aa7.46□□□□□ -1.22
RNF39-201ENST00000244360 FCGBPQ9Y6R7 5405 aaPredicted RBP7.44□□□□□ -1.22
RNF39-201ENST00000244360 KRTAP19-3Q7Z4W3 81 aa7.28□□□□□ -1.24
RNF39-201ENST00000244360 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
RNF39-201ENST00000244360 MT1GP13640 62 aa7.24□□□□□ -1.25
RNF39-201ENST00000244360 MT1MQ8N339 61 aa7.23□□□□□ -1.25
RNF39-201ENST00000244360 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
RNF39-201ENST00000244360 KRTAP4-3Q9BYR4 195 aa7.18□□□□□ -1.26
RNF39-201ENST00000244360 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
RNF39-201ENST00000244360 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
RNF39-201ENST00000244360 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
RNF39-201ENST00000244360 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
RNF39-201ENST00000244360 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
RNF39-201ENST00000244360 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
RNF39-201ENST00000244360 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
RNF39-201ENST00000244360 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.34
RNF39-201ENST00000244360 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
RNF39-201ENST00000244360 DSTQ03001 7570 aaKnown RBP6.65□□□□□ -1.34
RNF39-201ENST00000244360 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
RNF39-201ENST00000244360 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
RNF39-201ENST00000244360 SPRR2EP22531 72 aa6.53□□□□□ -1.36
RNF39-201ENST00000244360 SPRR2BP35325 72 aa6.53□□□□□ -1.36
RNF39-201ENST00000244360 SPRR2AP35326 72 aa6.53□□□□□ -1.36
RNF39-201ENST00000244360 MT1AP04731 61 aa6.49□□□□□ -1.37
RNF39-201ENST00000244360 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
RNF39-201ENST00000244360 KRTAP5-5Q701N2 237 aaPredicted RBP6.48□□□□□ -1.37
RNF39-201ENST00000244360 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
RNF39-201ENST00000244360 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
RNF39-201ENST00000244360 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
RNF39-201ENST00000244360 SPRR2DP22532 72 aa6.27□□□□□ -1.41
RNF39-201ENST00000244360 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
RNF39-201ENST00000244360 LCE3DQ9BYE3 92 aa6.15□□□□□ -1.43
RNF39-201ENST00000244360 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
RNF39-201ENST00000244360 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
RNF39-201ENST00000244360 LCE3EQ5T5B0 92 aa6.1□□□□□ -1.43
RNF39-201ENST00000244360 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
RNF39-201ENST00000244360 NEBP20929 6669 aa5.95□□□□□ -1.46
RNF39-201ENST00000244360 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
RNF39-201ENST00000244360 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
RNF39-201ENST00000244360 MT3P25713 68 aa5.82□□□□□ -1.48
RNF39-201ENST00000244360 PRM1P04553 51 aa5.79□□□□□ -1.48
RNF39-201ENST00000244360 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
RNF39-201ENST00000244360 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
RNF39-201ENST00000244360 MT4P47944 62 aa5.45□□□□□ -1.54
RNF39-201ENST00000244360 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
RNF39-201ENST00000244360 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
RNF39-201ENST00000244360 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
RNF39-201ENST00000244360 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
RNF39-201ENST00000244360 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
RNF39-201ENST00000244360 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
RNF39-201ENST00000244360 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
RNF39-201ENST00000244360 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
RNF39-201ENST00000244360 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
RNF39-201ENST00000244360 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
RNF39-201ENST00000244360 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.66
RNF39-201ENST00000244360 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
RNF39-201ENST00000244360 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
RNF39-201ENST00000244360 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
RNF39-201ENST00000244360 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
RNF39-201ENST00000244360 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
RNF39-201ENST00000244360 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
RNF39-201ENST00000244360 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
RNF39-201ENST00000244360 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
RNF39-201ENST00000244360 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
RNF39-201ENST00000244360 KRTAP21-2Q3LI59 83 aa4.23□□□□□ -1.73
RNF39-201ENST00000244360 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
RNF39-201ENST00000244360 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
RNF39-201ENST00000244360 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
RNF39-201ENST00000244360 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
RNF39-201ENST00000244360 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
RNF39-201ENST00000244360 KRTAP21-1Q3LI58 79 aa3.7□□□□□ -1.82
RNF39-201ENST00000244360 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
RNF39-201ENST00000244360 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
RNF39-201ENST00000244360 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
RNF39-201ENST00000244360 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.89
RNF39-201ENST00000244360 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
RNF39-201ENST00000244360 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms