RNA–Protein interactions for RNA: ENST00000239174.6

HOXB1-201, Transcript of homeobox B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB1, Length 2,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB1-201ENST00000239174 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
HOXB1-201ENST00000239174 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
HOXB1-201ENST00000239174 MT1LQ93083 61 aa5.95□□□□□ -1.46
HOXB1-201ENST00000239174 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
HOXB1-201ENST00000239174 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
HOXB1-201ENST00000239174 MT1EP04732 61 aa5.89□□□□□ -1.47
HOXB1-201ENST00000239174 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
HOXB1-201ENST00000239174 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
HOXB1-201ENST00000239174 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
HOXB1-201ENST00000239174 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
HOXB1-201ENST00000239174 MDN1Q9NU22 5596 aa5.59□□□□□ -1.52
HOXB1-201ENST00000239174 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
HOXB1-201ENST00000239174 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
HOXB1-201ENST00000239174 MT1GP13640 62 aa5.48□□□□□ -1.53
HOXB1-201ENST00000239174 MT1MQ8N339 61 aa5.47□□□□□ -1.53
HOXB1-201ENST00000239174 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
HOXB1-201ENST00000239174 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
HOXB1-201ENST00000239174 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
HOXB1-201ENST00000239174 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.54
HOXB1-201ENST00000239174 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
HOXB1-201ENST00000239174 MT1AP04731 61 aa5.35□□□□□ -1.55
HOXB1-201ENST00000239174 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
HOXB1-201ENST00000239174 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
HOXB1-201ENST00000239174 SPRR2EP22531 72 aa5.31□□□□□ -1.56
HOXB1-201ENST00000239174 SPRR2BP35325 72 aa5.31□□□□□ -1.56
HOXB1-201ENST00000239174 SPRR2AP35326 72 aa5.31□□□□□ -1.56
HOXB1-201ENST00000239174 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
HOXB1-201ENST00000239174 NEBP20929 6669 aa5.19□□□□□ -1.58
HOXB1-201ENST00000239174 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
HOXB1-201ENST00000239174 SPRR2DP22532 72 aa5.11□□□□□ -1.59
HOXB1-201ENST00000239174 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
HOXB1-201ENST00000239174 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
HOXB1-201ENST00000239174 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
HOXB1-201ENST00000239174 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
HOXB1-201ENST00000239174 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
HOXB1-201ENST00000239174 PRM1P04553 51 aa4.97□□□□□ -1.61
HOXB1-201ENST00000239174 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
HOXB1-201ENST00000239174 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
HOXB1-201ENST00000239174 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
HOXB1-201ENST00000239174 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
HOXB1-201ENST00000239174 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
HOXB1-201ENST00000239174 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
HOXB1-201ENST00000239174 MT4P47944 62 aa4.51□□□□□ -1.69
HOXB1-201ENST00000239174 MT3P25713 68 aa4.5□□□□□ -1.69
HOXB1-201ENST00000239174 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
HOXB1-201ENST00000239174 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
HOXB1-201ENST00000239174 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
HOXB1-201ENST00000239174 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
HOXB1-201ENST00000239174 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
HOXB1-201ENST00000239174 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
HOXB1-201ENST00000239174 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
HOXB1-201ENST00000239174 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
HOXB1-201ENST00000239174 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
HOXB1-201ENST00000239174 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
HOXB1-201ENST00000239174 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
HOXB1-201ENST00000239174 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
HOXB1-201ENST00000239174 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
HOXB1-201ENST00000239174 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
HOXB1-201ENST00000239174 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.82
HOXB1-201ENST00000239174 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
HOXB1-201ENST00000239174 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
HOXB1-201ENST00000239174 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
HOXB1-201ENST00000239174 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
HOXB1-201ENST00000239174 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
HOXB1-201ENST00000239174 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
HOXB1-201ENST00000239174 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
HOXB1-201ENST00000239174 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
HOXB1-201ENST00000239174 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
HOXB1-201ENST00000239174 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
HOXB1-201ENST00000239174 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
HOXB1-201ENST00000239174 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
HOXB1-201ENST00000239174 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
HOXB1-201ENST00000239174 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
HOXB1-201ENST00000239174 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
HOXB1-201ENST00000239174 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
HOXB1-201ENST00000239174 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
HOXB1-201ENST00000239174 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms