RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
PRDM2-201ENST00000235372 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
PRDM2-201ENST00000235372 KRTAP9-8Q9BYQ0 159 aa2.31□□□□□ -2.04
PRDM2-201ENST00000235372 KRTAP9-2Q9BYQ4 174 aa2.29□□□□□ -2.04
PRDM2-201ENST00000235372 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.04
PRDM2-201ENST00000235372 KRTAP9-3Q9BYQ3 159 aa2.27□□□□□ -2.05
PRDM2-201ENST00000235372 MT1EP04732 61 aa2.26□□□□□ -2.05
PRDM2-201ENST00000235372 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
PRDM2-201ENST00000235372 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
PRDM2-201ENST00000235372 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
PRDM2-201ENST00000235372 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
PRDM2-201ENST00000235372 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
PRDM2-201ENST00000235372 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
PRDM2-201ENST00000235372 MT1MQ8N339 61 aa2.24□□□□□ -2.05
PRDM2-201ENST00000235372 KRTAP19-6Q3LI70 58 aa2.2□□□□□ -2.06
PRDM2-201ENST00000235372 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
PRDM2-201ENST00000235372 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
PRDM2-201ENST00000235372 KRTAP19-2Q3LHN2 52 aa2.18□□□□□ -2.06
PRDM2-201ENST00000235372 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
PRDM2-201ENST00000235372 LRP2P98164 4655 aa2.17□□□□□ -2.06
PRDM2-201ENST00000235372 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
PRDM2-201ENST00000235372 MUC2Q02817 5179 aa2.12□□□□□ -2.07
PRDM2-201ENST00000235372 MT1AP04731 61 aa2.11□□□□□ -2.07
PRDM2-201ENST00000235372 USH2AO75445 5202 aa2.1□□□□□ -2.07
PRDM2-201ENST00000235372 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
PRDM2-201ENST00000235372 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
PRDM2-201ENST00000235372 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
PRDM2-201ENST00000235372 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
PRDM2-201ENST00000235372 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
PRDM2-201ENST00000235372 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
PRDM2-201ENST00000235372 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
PRDM2-201ENST00000235372 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
PRDM2-201ENST00000235372 KRTAP9-4Q9BYQ2 154 aa1.98□□□□□ -2.09
PRDM2-201ENST00000235372 LCE2AQ5TA79 106 aaPredicted RBP1.97□□□□□ -2.09
PRDM2-201ENST00000235372 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
PRDM2-201ENST00000235372 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
PRDM2-201ENST00000235372 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
PRDM2-201ENST00000235372 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
PRDM2-201ENST00000235372 FSIP2Q5CZC0 6907 aa1.9□□□□□ -2.1
PRDM2-201ENST00000235372 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.1
PRDM2-201ENST00000235372 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
PRDM2-201ENST00000235372 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
PRDM2-201ENST00000235372 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
PRDM2-201ENST00000235372 KMT2DO14686 5537 aa1.87□□□□□ -2.11
PRDM2-201ENST00000235372 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
PRDM2-201ENST00000235372 KRTAP4-6Q9BYQ5 205 aa1.75□□□□□ -2.13
PRDM2-201ENST00000235372 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
PRDM2-201ENST00000235372 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
PRDM2-201ENST00000235372 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
PRDM2-201ENST00000235372 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
PRDM2-201ENST00000235372 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
PRDM2-201ENST00000235372 MDN1Q9NU22 5596 aa1.71□□□□□ -2.14
PRDM2-201ENST00000235372 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
PRDM2-201ENST00000235372 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.14
PRDM2-201ENST00000235372 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
PRDM2-201ENST00000235372 KRTAP5-9P26371 169 aa1.49□□□□□ -2.17
PRDM2-201ENST00000235372 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
PRDM2-201ENST00000235372 NEBP20929 6669 aa1.45□□□□□ -2.18
PRDM2-201ENST00000235372 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
PRDM2-201ENST00000235372 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.19
PRDM2-201ENST00000235372 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
PRDM2-201ENST00000235372 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
PRDM2-201ENST00000235372 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
PRDM2-201ENST00000235372 KRTAP5-3Q6L8H2 238 aa1.23□□□□□ -2.21
PRDM2-201ENST00000235372 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
PRDM2-201ENST00000235372 KRTAP5-2Q701N4 177 aa1.12□□□□□ -2.23
PRDM2-201ENST00000235372 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
PRDM2-201ENST00000235372 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
PRDM2-201ENST00000235372 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
PRDM2-201ENST00000235372 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
PRDM2-201ENST00000235372 KRTAP5-11Q6L8G4 156 aa0.96□□□□□ -2.26
PRDM2-201ENST00000235372 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
PRDM2-201ENST00000235372 KRTAP5-1Q6L8H4 278 aa0.94□□□□□ -2.26
PRDM2-201ENST00000235372 KRTAP5-7Q6L8G8 165 aa0.93□□□□□ -2.26
PRDM2-201ENST00000235372 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
PRDM2-201ENST00000235372 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
PRDM2-201ENST00000235372 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 563.3 ms