RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 S4R3F8 94 aa1.04□□□□□ -2.24
PRKD3-201ENST00000234179 H0YAA0 97 aa1.03□□□□□ -2.25
PRKD3-201ENST00000234179 PRAC1Q96KF2 57 aa1.03□□□□□ -2.25
PRKD3-201ENST00000234179 MT1BP07438 61 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 SPATA8Q6RVD6 105 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 SPRR2EP22531 72 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 SPRR2BP35325 72 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 SPRR2AP35326 72 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 KRTAP12-2P59991 146 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 C4orf26Q17RF5 130 aa1.02□□□□□ -2.25
PRKD3-201ENST00000234179 A0A0D9SG42 100 aa1□□□□□ -2.25
PRKD3-201ENST00000234179 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
PRKD3-201ENST00000234179 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
PRKD3-201ENST00000234179 SPRR2DP22532 72 aa1□□□□□ -2.25
PRKD3-201ENST00000234179 Q5W150 140 aa0.99□□□□□ -2.25
PRKD3-201ENST00000234179 A0A1B0GU33 70 aa0.99□□□□□ -2.25
PRKD3-201ENST00000234179 SPANXA2-OT1Q8N9U9 137 aa0.99□□□□□ -2.25
PRKD3-201ENST00000234179 KMT2DO14686 5537 aa0.99□□□□□ -2.25
PRKD3-201ENST00000234179 ADM2Q7Z4H4 148 aa0.97□□□□□ -2.25
PRKD3-201ENST00000234179 A8MU10 97 aa0.97□□□□□ -2.25
PRKD3-201ENST00000234179 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
PRKD3-201ENST00000234179 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
PRKD3-201ENST00000234179 LINC01558Q9Y6Z2 57 aa0.96□□□□□ -2.26
PRKD3-201ENST00000234179 R4GN34 69 aa0.96□□□□□ -2.26
PRKD3-201ENST00000234179 KRTAP25-1Q3LHN0 102 aa0.94□□□□□ -2.26
PRKD3-201ENST00000234179 LCE1FQ5T754 118 aa0.94□□□□□ -2.26
PRKD3-201ENST00000234179 MT1XP80297 61 aa0.93□□□□□ -2.26
PRKD3-201ENST00000234179 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
PRKD3-201ENST00000234179 M0QZ58 72 aa0.92□□□□□ -2.26
PRKD3-201ENST00000234179 TNP1P09430 55 aa0.92□□□□□ -2.26
PRKD3-201ENST00000234179 KRTAP10-12P60413 245 aa0.92□□□□□ -2.26
PRKD3-201ENST00000234179 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
PRKD3-201ENST00000234179 HMCN1Q96RW7 5635 aa0.91□□□□□ -2.26
PRKD3-201ENST00000234179 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
PRKD3-201ENST00000234179 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
PRKD3-201ENST00000234179 OBSCNQ5VST9 7968 aa0.91□□□□□ -2.26
PRKD3-201ENST00000234179 KRTAP5-5Q701N2 237 aaPredicted RBP0.9□□□□□ -2.27
PRKD3-201ENST00000234179 INE1O15225 51 aa0.89□□□□□ -2.27
PRKD3-201ENST00000234179 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
PRKD3-201ENST00000234179 MT1GP13640 62 aa0.88□□□□□ -2.27
PRKD3-201ENST00000234179 KRTAP5-7Q6L8G8 165 aa0.88□□□□□ -2.27
PRKD3-201ENST00000234179 CYSTM1Q9H1C7 97 aa0.87□□□□□ -2.27
PRKD3-201ENST00000234179 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
PRKD3-201ENST00000234179 MT1EP04732 61 aa0.85□□□□□ -2.27
PRKD3-201ENST00000234179 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
PRKD3-201ENST00000234179 SPRR5A0A1B0GTR4 108 aa0.84□□□□□ -2.27
PRKD3-201ENST00000234179 KRTAP19-7Q3SYF9 63 aa0.83□□□□□ -2.28
PRKD3-201ENST00000234179 KRTAP12-4P60329 112 aa0.83□□□□□ -2.28
PRKD3-201ENST00000234179 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
PRKD3-201ENST00000234179 MT1MQ8N339 61 aa0.82□□□□□ -2.28
PRKD3-201ENST00000234179 MT4P47944 62 aa0.82□□□□□ -2.28
PRKD3-201ENST00000234179 MT1LQ93083 61 aa0.8□□□□□ -2.28
PRKD3-201ENST00000234179 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
PRKD3-201ENST00000234179 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
PRKD3-201ENST00000234179 KRTAP9-6A8MVA2 160 aa0.78□□□□□ -2.28
PRKD3-201ENST00000234179 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
PRKD3-201ENST00000234179 KRTAP12-3P60328 96 aa0.75□□□□□ -2.29
PRKD3-201ENST00000234179 LCE3AQ5TA76 89 aa0.75□□□□□ -2.29
PRKD3-201ENST00000234179 KRTAP12-1P59990 96 aa0.74□□□□□ -2.29
PRKD3-201ENST00000234179 KRTAP13-4Q3LI77 160 aa0.74□□□□□ -2.29
PRKD3-201ENST00000234179 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
PRKD3-201ENST00000234179 MT1AP04731 61 aa0.72□□□□□ -2.29
PRKD3-201ENST00000234179 KRTAP4-3Q9BYR4 195 aa0.7□□□□□ -2.3
PRKD3-201ENST00000234179 LCE3CQ5T5A8 94 aa0.67□□□□□ -2.3
PRKD3-201ENST00000234179 LCE1CQ5T751 118 aa0.67□□□□□ -2.3
PRKD3-201ENST00000234179 LCE1BQ5T7P3 118 aa0.67□□□□□ -2.3
PRKD3-201ENST00000234179 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.31
PRKD3-201ENST00000234179 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
PRKD3-201ENST00000234179 LCE3DQ9BYE3 92 aa0.6□□□□□ -2.31
PRKD3-201ENST00000234179 LCE3EQ5T5B0 92 aa0.57□□□□□ -2.32
PRKD3-201ENST00000234179 MUC19Q7Z5P9 8384 aa0.51□□□□□ -2.33
PRKD3-201ENST00000234179 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
PRKD3-201ENST00000234179 KRTAP21-2Q3LI59 83 aa0.48□□□□□ -2.33
PRKD3-201ENST00000234179 PRM1P04553 51 aa0.47□□□□□ -2.33
PRKD3-201ENST00000234179 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
PRKD3-201ENST00000234179 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms