RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 MT1AP04731 61 aa2.4□□□□□ -2.02
APOB-201ENST00000233242 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
APOB-201ENST00000233242 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
APOB-201ENST00000233242 LCE2DQ5TA82 110 aaPredicted RBP2.36□□□□□ -2.03
APOB-201ENST00000233242 LOC100996750A0A140TA64 210 aa2.35□□□□□ -2.03
APOB-201ENST00000233242 RNF213Q63HN8 5207 aa2.34□□□□□ -2.04
APOB-201ENST00000233242 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
APOB-201ENST00000233242 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
APOB-201ENST00000233242 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
APOB-201ENST00000233242 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
APOB-201ENST00000233242 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
APOB-201ENST00000233242 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
APOB-201ENST00000233242 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
APOB-201ENST00000233242 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
APOB-201ENST00000233242 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
APOB-201ENST00000233242 MT4P47944 62 aa2.21□□□□□ -2.06
APOB-201ENST00000233242 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
APOB-201ENST00000233242 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
APOB-201ENST00000233242 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
APOB-201ENST00000233242 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
APOB-201ENST00000233242 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
APOB-201ENST00000233242 LCE5AQ5TCM9 118 aa2.14□□□□□ -2.07
APOB-201ENST00000233242 KRTAP9-2Q9BYQ4 174 aa2.13□□□□□ -2.07
APOB-201ENST00000233242 KRTAP9-7A8MTY7 169 aa2.12□□□□□ -2.07
APOB-201ENST00000233242 LCE2AQ5TA79 106 aaPredicted RBP2.1□□□□□ -2.07
APOB-201ENST00000233242 MUC2Q02817 5179 aa2.1□□□□□ -2.07
APOB-201ENST00000233242 KRTAP2-2Q9BYT5 123 aa2.09□□□□□ -2.07
APOB-201ENST00000233242 LPAP08519 4548 aa2.09□□□□□ -2.07
APOB-201ENST00000233242 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
APOB-201ENST00000233242 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
APOB-201ENST00000233242 LCE4AQ5TA78 99 aa2.04□□□□□ -2.08
APOB-201ENST00000233242 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
APOB-201ENST00000233242 USH2AO75445 5202 aa2.01□□□□□ -2.09
APOB-201ENST00000233242 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
APOB-201ENST00000233242 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
APOB-201ENST00000233242 SYNE2Q8WXH0 6885 aaKnown RBP1.95□□□□□ -2.1
APOB-201ENST00000233242 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
APOB-201ENST00000233242 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
APOB-201ENST00000233242 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.1
APOB-201ENST00000233242 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
APOB-201ENST00000233242 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
APOB-201ENST00000233242 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
APOB-201ENST00000233242 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
APOB-201ENST00000233242 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
APOB-201ENST00000233242 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
APOB-201ENST00000233242 NEBP20929 6669 aa1.82□□□□□ -2.12
APOB-201ENST00000233242 KRTAP4-11Q9BYQ6 195 aa1.79□□□□□ -2.12
APOB-201ENST00000233242 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.76□□□□□ -2.13
APOB-201ENST00000233242 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
APOB-201ENST00000233242 KRTAP9-9Q9BYP9 154 aa1.74□□□□□ -2.13
APOB-201ENST00000233242 KMT2DO14686 5537 aa1.72□□□□□ -2.13
APOB-201ENST00000233242 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
APOB-201ENST00000233242 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
APOB-201ENST00000233242 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
APOB-201ENST00000233242 KRTAP4-6Q9BYQ5 205 aa1.6□□□□□ -2.15
APOB-201ENST00000233242 KRTAP5-4Q6L8H1 288 aa1.56□□□□□ -2.16
APOB-201ENST00000233242 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
APOB-201ENST00000233242 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
APOB-201ENST00000233242 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
APOB-201ENST00000233242 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
APOB-201ENST00000233242 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
APOB-201ENST00000233242 KRTAP4-12Q9BQ66 201 aa1.42□□□□□ -2.18
APOB-201ENST00000233242 KRTAP4-2Q9BYR5 136 aa1.42□□□□□ -2.18
APOB-201ENST00000233242 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
APOB-201ENST00000233242 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
APOB-201ENST00000233242 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
APOB-201ENST00000233242 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
APOB-201ENST00000233242 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
APOB-201ENST00000233242 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
APOB-201ENST00000233242 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
APOB-201ENST00000233242 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
APOB-201ENST00000233242 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
APOB-201ENST00000233242 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
APOB-201ENST00000233242 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
APOB-201ENST00000233242 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
APOB-201ENST00000233242 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
APOB-201ENST00000233242 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 252.5 ms