RNA–Protein interactions for RNA: ENST00000227157.8

LDHA-201, Transcript of lactate dehydrogenase A, humanhuman

TSL 3 BASIC

Gene LDHA, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-201ENST00000227157 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
LDHA-201ENST00000227157 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
LDHA-201ENST00000227157 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
LDHA-201ENST00000227157 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
LDHA-201ENST00000227157 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
LDHA-201ENST00000227157 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
LDHA-201ENST00000227157 KMT2DO14686 5537 aa3.39□□□□□ -1.87
LDHA-201ENST00000227157 MT1XP80297 61 aa3.38□□□□□ -1.87
LDHA-201ENST00000227157 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
LDHA-201ENST00000227157 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
LDHA-201ENST00000227157 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
LDHA-201ENST00000227157 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
LDHA-201ENST00000227157 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
LDHA-201ENST00000227157 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
LDHA-201ENST00000227157 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
LDHA-201ENST00000227157 NEBP20929 6669 aa3.15□□□□□ -1.9
LDHA-201ENST00000227157 MDN1Q9NU22 5596 aa3.15□□□□□ -1.91
LDHA-201ENST00000227157 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
LDHA-201ENST00000227157 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
LDHA-201ENST00000227157 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.92
LDHA-201ENST00000227157 SPRR2EP22531 72 aa3.04□□□□□ -1.92
LDHA-201ENST00000227157 SPRR2BP35325 72 aa3.04□□□□□ -1.92
LDHA-201ENST00000227157 SPRR2AP35326 72 aa3.04□□□□□ -1.92
LDHA-201ENST00000227157 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
LDHA-201ENST00000227157 TNP1P09430 55 aa3.03□□□□□ -1.92
LDHA-201ENST00000227157 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
LDHA-201ENST00000227157 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
LDHA-201ENST00000227157 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
LDHA-201ENST00000227157 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
LDHA-201ENST00000227157 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
LDHA-201ENST00000227157 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
LDHA-201ENST00000227157 MT1EP04732 61 aa2.97□□□□□ -1.93
LDHA-201ENST00000227157 SPRR2DP22532 72 aa2.92□□□□□ -1.94
LDHA-201ENST00000227157 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
LDHA-201ENST00000227157 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
LDHA-201ENST00000227157 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.94
LDHA-201ENST00000227157 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
LDHA-201ENST00000227157 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
LDHA-201ENST00000227157 MT1LQ93083 61 aa2.87□□□□□ -1.95
LDHA-201ENST00000227157 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
LDHA-201ENST00000227157 MT1MQ8N339 61 aa2.82□□□□□ -1.96
LDHA-201ENST00000227157 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
LDHA-201ENST00000227157 MT1GP13640 62 aa2.82□□□□□ -1.96
LDHA-201ENST00000227157 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
LDHA-201ENST00000227157 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
LDHA-201ENST00000227157 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
LDHA-201ENST00000227157 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
LDHA-201ENST00000227157 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
LDHA-201ENST00000227157 MT4P47944 62 aa2.6□□□□□ -1.99
LDHA-201ENST00000227157 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
LDHA-201ENST00000227157 MT3P25713 68 aa2.59□□□□□ -1.99
LDHA-201ENST00000227157 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
LDHA-201ENST00000227157 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
LDHA-201ENST00000227157 LCE1FQ5T754 118 aa2.57□□□□□ -2
LDHA-201ENST00000227157 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
LDHA-201ENST00000227157 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
LDHA-201ENST00000227157 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
LDHA-201ENST00000227157 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
LDHA-201ENST00000227157 MT1AP04731 61 aa2.42□□□□□ -2.02
LDHA-201ENST00000227157 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
LDHA-201ENST00000227157 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
LDHA-201ENST00000227157 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
LDHA-201ENST00000227157 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
LDHA-201ENST00000227157 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
LDHA-201ENST00000227157 PRM1P04553 51 aa2.2□□□□□ -2.06
LDHA-201ENST00000227157 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
LDHA-201ENST00000227157 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
LDHA-201ENST00000227157 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
LDHA-201ENST00000227157 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
LDHA-201ENST00000227157 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
LDHA-201ENST00000227157 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
LDHA-201ENST00000227157 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
LDHA-201ENST00000227157 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
LDHA-201ENST00000227157 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
LDHA-201ENST00000227157 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
LDHA-201ENST00000227157 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
LDHA-201ENST00000227157 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms