RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
HOXA6-201ENST00000222728 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
HOXA6-201ENST00000222728 MT1LQ93083 61 aa7.08□□□□□ -1.28
HOXA6-201ENST00000222728 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
HOXA6-201ENST00000222728 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
HOXA6-201ENST00000222728 MT1GP13640 62 aa7.02□□□□□ -1.29
HOXA6-201ENST00000222728 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
HOXA6-201ENST00000222728 MT1MQ8N339 61 aa6.95□□□□□ -1.3
HOXA6-201ENST00000222728 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
HOXA6-201ENST00000222728 KRTAP2-2Q9BYT5 123 aa6.88□□□□□ -1.31
HOXA6-201ENST00000222728 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
HOXA6-201ENST00000222728 DSTQ03001 7570 aaKnown RBP6.86□□□□□ -1.31
HOXA6-201ENST00000222728 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
HOXA6-201ENST00000222728 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
HOXA6-201ENST00000222728 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
HOXA6-201ENST00000222728 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
HOXA6-201ENST00000222728 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
HOXA6-201ENST00000222728 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
HOXA6-201ENST00000222728 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
HOXA6-201ENST00000222728 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
HOXA6-201ENST00000222728 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
HOXA6-201ENST00000222728 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
HOXA6-201ENST00000222728 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
HOXA6-201ENST00000222728 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
HOXA6-201ENST00000222728 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
HOXA6-201ENST00000222728 MT4P47944 62 aa6.29□□□□□ -1.4
HOXA6-201ENST00000222728 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
HOXA6-201ENST00000222728 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
HOXA6-201ENST00000222728 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
HOXA6-201ENST00000222728 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
HOXA6-201ENST00000222728 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
HOXA6-201ENST00000222728 MT1AP04731 61 aa6.01□□□□□ -1.45
HOXA6-201ENST00000222728 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
HOXA6-201ENST00000222728 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
HOXA6-201ENST00000222728 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
HOXA6-201ENST00000222728 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
HOXA6-201ENST00000222728 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
HOXA6-201ENST00000222728 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
HOXA6-201ENST00000222728 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
HOXA6-201ENST00000222728 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
HOXA6-201ENST00000222728 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
HOXA6-201ENST00000222728 GPR98Q8WXG9 6306 aa5.74□□□□□ -1.49
HOXA6-201ENST00000222728 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
HOXA6-201ENST00000222728 KRTAP5-2Q701N4 177 aa5.62□□□□□ -1.51
HOXA6-201ENST00000222728 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
HOXA6-201ENST00000222728 MT3P25713 68 aa5.47□□□□□ -1.53
HOXA6-201ENST00000222728 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
HOXA6-201ENST00000222728 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
HOXA6-201ENST00000222728 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
HOXA6-201ENST00000222728 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
HOXA6-201ENST00000222728 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
HOXA6-201ENST00000222728 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
HOXA6-201ENST00000222728 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
HOXA6-201ENST00000222728 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
HOXA6-201ENST00000222728 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
HOXA6-201ENST00000222728 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
HOXA6-201ENST00000222728 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
HOXA6-201ENST00000222728 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
HOXA6-201ENST00000222728 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
HOXA6-201ENST00000222728 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
HOXA6-201ENST00000222728 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
HOXA6-201ENST00000222728 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
HOXA6-201ENST00000222728 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
HOXA6-201ENST00000222728 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
HOXA6-201ENST00000222728 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
HOXA6-201ENST00000222728 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
HOXA6-201ENST00000222728 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
HOXA6-201ENST00000222728 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
HOXA6-201ENST00000222728 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
HOXA6-201ENST00000222728 H3BS24 57 aa3.81□□□□□ -1.8
HOXA6-201ENST00000222728 INE1O15225 51 aa3.81□□□□□ -1.8
HOXA6-201ENST00000222728 PRM1P04553 51 aa3.75□□□□□ -1.81
HOXA6-201ENST00000222728 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
HOXA6-201ENST00000222728 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
HOXA6-201ENST00000222728 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
HOXA6-201ENST00000222728 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
HOXA6-201ENST00000222728 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 1332 ms