RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
SIPA1L3-201ENST00000222345 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
SIPA1L3-201ENST00000222345 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
SIPA1L3-201ENST00000222345 LRP2P98164 4655 aa3.83□□□□□ -1.8
SIPA1L3-201ENST00000222345 RYR2Q92736 4967 aa3.81□□□□□ -1.8
SIPA1L3-201ENST00000222345 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
SIPA1L3-201ENST00000222345 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
SIPA1L3-201ENST00000222345 HERC1Q15751 4861 aa3.74□□□□□ -1.81
SIPA1L3-201ENST00000222345 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
SIPA1L3-201ENST00000222345 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
SIPA1L3-201ENST00000222345 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
SIPA1L3-201ENST00000222345 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
SIPA1L3-201ENST00000222345 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
SIPA1L3-201ENST00000222345 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
SIPA1L3-201ENST00000222345 HERC2O95714 4834 aa3.73□□□□□ -1.81
SIPA1L3-201ENST00000222345 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
SIPA1L3-201ENST00000222345 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
SIPA1L3-201ENST00000222345 BIRC6Q9NR09 4857 aa3.66□□□□□ -1.82
SIPA1L3-201ENST00000222345 LCE4AQ5TA78 99 aa3.59□□□□□ -1.84
SIPA1L3-201ENST00000222345 KMT2CQ8NEZ4 4911 aaKnown RBP3.58□□□□□ -1.84
SIPA1L3-201ENST00000222345 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
SIPA1L3-201ENST00000222345 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
SIPA1L3-201ENST00000222345 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
SIPA1L3-201ENST00000222345 LCE2AQ5TA79 106 aaPredicted RBP3.54□□□□□ -1.84
SIPA1L3-201ENST00000222345 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
SIPA1L3-201ENST00000222345 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
SIPA1L3-201ENST00000222345 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
SIPA1L3-201ENST00000222345 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
SIPA1L3-201ENST00000222345 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
SIPA1L3-201ENST00000222345 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SIPA1L3-201ENST00000222345 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
SIPA1L3-201ENST00000222345 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
SIPA1L3-201ENST00000222345 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
SIPA1L3-201ENST00000222345 EPPK1P58107 5090 aaKnown RBP3.28□□□□□ -1.88
SIPA1L3-201ENST00000222345 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
SIPA1L3-201ENST00000222345 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
SIPA1L3-201ENST00000222345 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
SIPA1L3-201ENST00000222345 MUC2Q02817 5179 aa3.08□□□□□ -1.92
SIPA1L3-201ENST00000222345 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
SIPA1L3-201ENST00000222345 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
SIPA1L3-201ENST00000222345 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SIPA1L3-201ENST00000222345 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
SIPA1L3-201ENST00000222345 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SIPA1L3-201ENST00000222345 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SIPA1L3-201ENST00000222345 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
SIPA1L3-201ENST00000222345 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
SIPA1L3-201ENST00000222345 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
SIPA1L3-201ENST00000222345 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
SIPA1L3-201ENST00000222345 KMT2DO14686 5537 aa2.78□□□□□ -1.96
SIPA1L3-201ENST00000222345 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
SIPA1L3-201ENST00000222345 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
SIPA1L3-201ENST00000222345 NEBP20929 6669 aa2.66□□□□□ -1.98
SIPA1L3-201ENST00000222345 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
SIPA1L3-201ENST00000222345 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
SIPA1L3-201ENST00000222345 USH2AO75445 5202 aa2.51□□□□□ -2.01
SIPA1L3-201ENST00000222345 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
SIPA1L3-201ENST00000222345 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SIPA1L3-201ENST00000222345 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
SIPA1L3-201ENST00000222345 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
SIPA1L3-201ENST00000222345 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
SIPA1L3-201ENST00000222345 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
SIPA1L3-201ENST00000222345 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
SIPA1L3-201ENST00000222345 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
SIPA1L3-201ENST00000222345 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
SIPA1L3-201ENST00000222345 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
SIPA1L3-201ENST00000222345 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
SIPA1L3-201ENST00000222345 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SIPA1L3-201ENST00000222345 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
SIPA1L3-201ENST00000222345 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
SIPA1L3-201ENST00000222345 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
SIPA1L3-201ENST00000222345 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
SIPA1L3-201ENST00000222345 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SIPA1L3-201ENST00000222345 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
SIPA1L3-201ENST00000222345 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
SIPA1L3-201ENST00000222345 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SIPA1L3-201ENST00000222345 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
SIPA1L3-201ENST00000222345 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 98.1 ms