RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
KNOP1-201ENST00000219837 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
KNOP1-201ENST00000219837 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
KNOP1-201ENST00000219837 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
KNOP1-201ENST00000219837 MT1AP04731 61 aa3.17□□□□□ -1.9
KNOP1-201ENST00000219837 HERC2O95714 4834 aa3.14□□□□□ -1.91
KNOP1-201ENST00000219837 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
KNOP1-201ENST00000219837 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
KNOP1-201ENST00000219837 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
KNOP1-201ENST00000219837 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
KNOP1-201ENST00000219837 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.92
KNOP1-201ENST00000219837 LRP2P98164 4655 aa3.09□□□□□ -1.92
KNOP1-201ENST00000219837 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
KNOP1-201ENST00000219837 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
KNOP1-201ENST00000219837 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
KNOP1-201ENST00000219837 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
KNOP1-201ENST00000219837 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
KNOP1-201ENST00000219837 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
KNOP1-201ENST00000219837 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
KNOP1-201ENST00000219837 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
KNOP1-201ENST00000219837 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
KNOP1-201ENST00000219837 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
KNOP1-201ENST00000219837 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
KNOP1-201ENST00000219837 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
KNOP1-201ENST00000219837 KIAA1109Q2LD37 5005 aa2.92□□□□□ -1.94
KNOP1-201ENST00000219837 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
KNOP1-201ENST00000219837 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
KNOP1-201ENST00000219837 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
KNOP1-201ENST00000219837 HMCN2Q8NDA2 5059 aa2.78□□□□□ -1.96
KNOP1-201ENST00000219837 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
KNOP1-201ENST00000219837 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
KNOP1-201ENST00000219837 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.99
KNOP1-201ENST00000219837 EPPK1P58107 5090 aaKnown RBP2.61□□□□□ -1.99
KNOP1-201ENST00000219837 ABCA13Q86UQ4 5058 aa2.6□□□□□ -1.99
KNOP1-201ENST00000219837 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
KNOP1-201ENST00000219837 RNF213Q63HN8 5207 aa2.54□□□□□ -2
KNOP1-201ENST00000219837 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
KNOP1-201ENST00000219837 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
KNOP1-201ENST00000219837 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
KNOP1-201ENST00000219837 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
KNOP1-201ENST00000219837 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
KNOP1-201ENST00000219837 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
KNOP1-201ENST00000219837 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
KNOP1-201ENST00000219837 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
KNOP1-201ENST00000219837 MUC2Q02817 5179 aa2.34□□□□□ -2.04
KNOP1-201ENST00000219837 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
KNOP1-201ENST00000219837 NEBP20929 6669 aa2.28□□□□□ -2.04
KNOP1-201ENST00000219837 KMT2DO14686 5537 aa2.14□□□□□ -2.07
KNOP1-201ENST00000219837 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
KNOP1-201ENST00000219837 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
KNOP1-201ENST00000219837 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
KNOP1-201ENST00000219837 SSPOA2VEC9 5147 aa2.09□□□□□ -2.07
KNOP1-201ENST00000219837 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
KNOP1-201ENST00000219837 USH2AO75445 5202 aa2.01□□□□□ -2.09
KNOP1-201ENST00000219837 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
KNOP1-201ENST00000219837 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
KNOP1-201ENST00000219837 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
KNOP1-201ENST00000219837 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
KNOP1-201ENST00000219837 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
KNOP1-201ENST00000219837 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
KNOP1-201ENST00000219837 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
KNOP1-201ENST00000219837 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
KNOP1-201ENST00000219837 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
KNOP1-201ENST00000219837 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
KNOP1-201ENST00000219837 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
KNOP1-201ENST00000219837 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
KNOP1-201ENST00000219837 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
KNOP1-201ENST00000219837 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
KNOP1-201ENST00000219837 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
KNOP1-201ENST00000219837 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
KNOP1-201ENST00000219837 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
KNOP1-201ENST00000219837 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
KNOP1-201ENST00000219837 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
KNOP1-201ENST00000219837 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
KNOP1-201ENST00000219837 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
KNOP1-201ENST00000219837 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
KNOP1-201ENST00000219837 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 60.5 ms