RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
USB1-201ENST00000219281 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
USB1-201ENST00000219281 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
USB1-201ENST00000219281 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
USB1-201ENST00000219281 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
USB1-201ENST00000219281 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
USB1-201ENST00000219281 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
USB1-201ENST00000219281 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
USB1-201ENST00000219281 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
USB1-201ENST00000219281 MT1GP13640 62 aa5.59□□□□□ -1.51
USB1-201ENST00000219281 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
USB1-201ENST00000219281 MT1MQ8N339 61 aa5.54□□□□□ -1.52
USB1-201ENST00000219281 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
USB1-201ENST00000219281 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
USB1-201ENST00000219281 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
USB1-201ENST00000219281 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
USB1-201ENST00000219281 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
USB1-201ENST00000219281 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
USB1-201ENST00000219281 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
USB1-201ENST00000219281 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
USB1-201ENST00000219281 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
USB1-201ENST00000219281 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
USB1-201ENST00000219281 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
USB1-201ENST00000219281 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
USB1-201ENST00000219281 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
USB1-201ENST00000219281 SPRR2EP22531 72 aa5.1□□□□□ -1.59
USB1-201ENST00000219281 SPRR2BP35325 72 aa5.1□□□□□ -1.59
USB1-201ENST00000219281 SPRR2AP35326 72 aa5.1□□□□□ -1.59
USB1-201ENST00000219281 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
USB1-201ENST00000219281 NEBP20929 6669 aa5.02□□□□□ -1.61
USB1-201ENST00000219281 MT1AP04731 61 aa5.02□□□□□ -1.61
USB1-201ENST00000219281 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
USB1-201ENST00000219281 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
USB1-201ENST00000219281 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.62
USB1-201ENST00000219281 SPRR2DP22532 72 aa4.89□□□□□ -1.63
USB1-201ENST00000219281 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
USB1-201ENST00000219281 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
USB1-201ENST00000219281 PRM1P04553 51 aa4.7□□□□□ -1.66
USB1-201ENST00000219281 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
USB1-201ENST00000219281 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
USB1-201ENST00000219281 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
USB1-201ENST00000219281 MT3P25713 68 aa4.47□□□□□ -1.69
USB1-201ENST00000219281 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
USB1-201ENST00000219281 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
USB1-201ENST00000219281 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
USB1-201ENST00000219281 MT4P47944 62 aa4.31□□□□□ -1.72
USB1-201ENST00000219281 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
USB1-201ENST00000219281 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
USB1-201ENST00000219281 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
USB1-201ENST00000219281 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
USB1-201ENST00000219281 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
USB1-201ENST00000219281 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
USB1-201ENST00000219281 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
USB1-201ENST00000219281 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
USB1-201ENST00000219281 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
USB1-201ENST00000219281 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
USB1-201ENST00000219281 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
USB1-201ENST00000219281 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
USB1-201ENST00000219281 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
USB1-201ENST00000219281 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
USB1-201ENST00000219281 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
USB1-201ENST00000219281 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
USB1-201ENST00000219281 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
USB1-201ENST00000219281 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
USB1-201ENST00000219281 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
USB1-201ENST00000219281 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
USB1-201ENST00000219281 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
USB1-201ENST00000219281 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
USB1-201ENST00000219281 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
USB1-201ENST00000219281 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
USB1-201ENST00000219281 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
USB1-201ENST00000219281 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
USB1-201ENST00000219281 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
USB1-201ENST00000219281 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
USB1-201ENST00000219281 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
USB1-201ENST00000219281 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
USB1-201ENST00000219281 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms