RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
MTHFD1-201ENST00000216605 MT1EP04732 61 aa3.13□□□□□ -1.91
MTHFD1-201ENST00000216605 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
MTHFD1-201ENST00000216605 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
MTHFD1-201ENST00000216605 MT1LQ93083 61 aa3.1□□□□□ -1.91
MTHFD1-201ENST00000216605 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
MTHFD1-201ENST00000216605 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
MTHFD1-201ENST00000216605 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
MTHFD1-201ENST00000216605 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
MTHFD1-201ENST00000216605 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
MTHFD1-201ENST00000216605 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
MTHFD1-201ENST00000216605 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
MTHFD1-201ENST00000216605 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
MTHFD1-201ENST00000216605 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
MTHFD1-201ENST00000216605 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
MTHFD1-201ENST00000216605 MT1GP13640 62 aa2.98□□□□□ -1.93
MTHFD1-201ENST00000216605 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
MTHFD1-201ENST00000216605 MT1MQ8N339 61 aa2.95□□□□□ -1.94
MTHFD1-201ENST00000216605 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
MTHFD1-201ENST00000216605 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
MTHFD1-201ENST00000216605 SPRR2EP22531 72 aa2.88□□□□□ -1.95
MTHFD1-201ENST00000216605 SPRR2BP35325 72 aa2.88□□□□□ -1.95
MTHFD1-201ENST00000216605 SPRR2AP35326 72 aa2.88□□□□□ -1.95
MTHFD1-201ENST00000216605 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
MTHFD1-201ENST00000216605 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
MTHFD1-201ENST00000216605 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
MTHFD1-201ENST00000216605 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
MTHFD1-201ENST00000216605 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
MTHFD1-201ENST00000216605 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
MTHFD1-201ENST00000216605 SPRR2DP22532 72 aa2.76□□□□□ -1.97
MTHFD1-201ENST00000216605 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
MTHFD1-201ENST00000216605 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
MTHFD1-201ENST00000216605 MT3P25713 68 aa2.67□□□□□ -1.98
MTHFD1-201ENST00000216605 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
MTHFD1-201ENST00000216605 MT1AP04731 61 aa2.62□□□□□ -1.99
MTHFD1-201ENST00000216605 PRM1P04553 51 aa2.57□□□□□ -2
MTHFD1-201ENST00000216605 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
MTHFD1-201ENST00000216605 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
MTHFD1-201ENST00000216605 NEBP20929 6669 aa2.54□□□□□ -2
MTHFD1-201ENST00000216605 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
MTHFD1-201ENST00000216605 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
MTHFD1-201ENST00000216605 MT4P47944 62 aa2.46□□□□□ -2.02
MTHFD1-201ENST00000216605 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
MTHFD1-201ENST00000216605 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
MTHFD1-201ENST00000216605 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
MTHFD1-201ENST00000216605 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
MTHFD1-201ENST00000216605 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
MTHFD1-201ENST00000216605 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
MTHFD1-201ENST00000216605 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
MTHFD1-201ENST00000216605 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
MTHFD1-201ENST00000216605 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
MTHFD1-201ENST00000216605 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
MTHFD1-201ENST00000216605 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
MTHFD1-201ENST00000216605 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
MTHFD1-201ENST00000216605 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
MTHFD1-201ENST00000216605 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
MTHFD1-201ENST00000216605 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
MTHFD1-201ENST00000216605 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
MTHFD1-201ENST00000216605 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
MTHFD1-201ENST00000216605 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
MTHFD1-201ENST00000216605 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
MTHFD1-201ENST00000216605 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
MTHFD1-201ENST00000216605 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
MTHFD1-201ENST00000216605 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
MTHFD1-201ENST00000216605 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
MTHFD1-201ENST00000216605 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
MTHFD1-201ENST00000216605 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.17
MTHFD1-201ENST00000216605 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
MTHFD1-201ENST00000216605 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 126.2 ms