RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
ERCC1-201ENST00000013807 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
ERCC1-201ENST00000013807 MT4P47944 62 aa5.56□□□□□ -1.52
ERCC1-201ENST00000013807 H7BZZ5 65 aa5.55□□□□□ -1.52
ERCC1-201ENST00000013807 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
ERCC1-201ENST00000013807 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
ERCC1-201ENST00000013807 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
ERCC1-201ENST00000013807 A0A1B0GU69 56 aa5.47□□□□□ -1.53
ERCC1-201ENST00000013807 TNP1P09430 55 aa5.47□□□□□ -1.53
ERCC1-201ENST00000013807 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
ERCC1-201ENST00000013807 A8MU10 97 aa5.45□□□□□ -1.54
ERCC1-201ENST00000013807 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
ERCC1-201ENST00000013807 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
ERCC1-201ENST00000013807 KRTAP4-12Q9BQ66 201 aa5.43□□□□□ -1.54
ERCC1-201ENST00000013807 Q1T7F1 81 aa5.41□□□□□ -1.54
ERCC1-201ENST00000013807 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
ERCC1-201ENST00000013807 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
ERCC1-201ENST00000013807 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
ERCC1-201ENST00000013807 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
ERCC1-201ENST00000013807 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
ERCC1-201ENST00000013807 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
ERCC1-201ENST00000013807 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
ERCC1-201ENST00000013807 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
ERCC1-201ENST00000013807 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
ERCC1-201ENST00000013807 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
ERCC1-201ENST00000013807 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
ERCC1-201ENST00000013807 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
ERCC1-201ENST00000013807 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
ERCC1-201ENST00000013807 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
ERCC1-201ENST00000013807 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
ERCC1-201ENST00000013807 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
ERCC1-201ENST00000013807 PSPHP1O15172 72 aa5.11□□□□□ -1.59
ERCC1-201ENST00000013807 UQCR11O14957 56 aa5.1□□□□□ -1.59
ERCC1-201ENST00000013807 A6NED7 52 aa5.09□□□□□ -1.59
ERCC1-201ENST00000013807 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
ERCC1-201ENST00000013807 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
ERCC1-201ENST00000013807 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
ERCC1-201ENST00000013807 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
ERCC1-201ENST00000013807 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
ERCC1-201ENST00000013807 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
ERCC1-201ENST00000013807 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
ERCC1-201ENST00000013807 K7ERS5 55 aa4.88□□□□□ -1.63
ERCC1-201ENST00000013807 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
ERCC1-201ENST00000013807 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
ERCC1-201ENST00000013807 MT1AP04731 61 aa4.8□□□□□ -1.64
ERCC1-201ENST00000013807 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
ERCC1-201ENST00000013807 H3BS24 57 aa4.76□□□□□ -1.65
ERCC1-201ENST00000013807 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
ERCC1-201ENST00000013807 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
ERCC1-201ENST00000013807 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
ERCC1-201ENST00000013807 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
ERCC1-201ENST00000013807 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
ERCC1-201ENST00000013807 ROMO1P60602 79 aa4.55□□□□□ -1.68
ERCC1-201ENST00000013807 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
ERCC1-201ENST00000013807 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
ERCC1-201ENST00000013807 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
ERCC1-201ENST00000013807 MT3P25713 68 aa4.4□□□□□ -1.71
ERCC1-201ENST00000013807 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
ERCC1-201ENST00000013807 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
ERCC1-201ENST00000013807 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
ERCC1-201ENST00000013807 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
ERCC1-201ENST00000013807 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
ERCC1-201ENST00000013807 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
ERCC1-201ENST00000013807 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
ERCC1-201ENST00000013807 INE1O15225 51 aa3.66□□□□□ -1.82
ERCC1-201ENST00000013807 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
ERCC1-201ENST00000013807 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
ERCC1-201ENST00000013807 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
ERCC1-201ENST00000013807 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
ERCC1-201ENST00000013807 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
ERCC1-201ENST00000013807 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
ERCC1-201ENST00000013807 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
ERCC1-201ENST00000013807 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
ERCC1-201ENST00000013807 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
ERCC1-201ENST00000013807 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
ERCC1-201ENST00000013807 PRM1P04553 51 aa2.27□□□□□ -2.05
ERCC1-201ENST00000013807 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 189 ms