RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 MT1LQ93083 61 aa6.6□□□□□ -1.35
HOXA11-201ENST00000006015 FCGBPQ9Y6R7 5405 aaPredicted RBP6.59□□□□□ -1.35
HOXA11-201ENST00000006015 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
HOXA11-201ENST00000006015 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
HOXA11-201ENST00000006015 MACF1Q9UPN3 7388 aaKnown RBP6.31□□□□□ -1.4
HOXA11-201ENST00000006015 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
HOXA11-201ENST00000006015 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
HOXA11-201ENST00000006015 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
HOXA11-201ENST00000006015 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
HOXA11-201ENST00000006015 MT1GP13640 62 aa6.22□□□□□ -1.41
HOXA11-201ENST00000006015 MT1MQ8N339 61 aa6.21□□□□□ -1.42
HOXA11-201ENST00000006015 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
HOXA11-201ENST00000006015 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
HOXA11-201ENST00000006015 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
HOXA11-201ENST00000006015 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
HOXA11-201ENST00000006015 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
HOXA11-201ENST00000006015 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
HOXA11-201ENST00000006015 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
HOXA11-201ENST00000006015 MT1AP04731 61 aa5.83□□□□□ -1.48
HOXA11-201ENST00000006015 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
HOXA11-201ENST00000006015 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
HOXA11-201ENST00000006015 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
HOXA11-201ENST00000006015 KRTAP5-9P26371 169 aa5.72□□□□□ -1.49
HOXA11-201ENST00000006015 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
HOXA11-201ENST00000006015 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
HOXA11-201ENST00000006015 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.5
HOXA11-201ENST00000006015 SPRR2EP22531 72 aa5.65□□□□□ -1.51
HOXA11-201ENST00000006015 SPRR2BP35325 72 aa5.65□□□□□ -1.51
HOXA11-201ENST00000006015 SPRR2AP35326 72 aa5.65□□□□□ -1.51
HOXA11-201ENST00000006015 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
HOXA11-201ENST00000006015 PRM1P04553 51 aa5.62□□□□□ -1.51
HOXA11-201ENST00000006015 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
HOXA11-201ENST00000006015 KRTAP9-7A8MTY7 169 aa5.6□□□□□ -1.51
HOXA11-201ENST00000006015 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
HOXA11-201ENST00000006015 SPRR2DP22532 72 aa5.4□□□□□ -1.55
HOXA11-201ENST00000006015 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
HOXA11-201ENST00000006015 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
HOXA11-201ENST00000006015 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
HOXA11-201ENST00000006015 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
HOXA11-201ENST00000006015 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
HOXA11-201ENST00000006015 NEBP20929 6669 aa5.1□□□□□ -1.59
HOXA11-201ENST00000006015 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
HOXA11-201ENST00000006015 MT3P25713 68 aa4.96□□□□□ -1.62
HOXA11-201ENST00000006015 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
HOXA11-201ENST00000006015 MT4P47944 62 aa4.83□□□□□ -1.64
HOXA11-201ENST00000006015 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
HOXA11-201ENST00000006015 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
HOXA11-201ENST00000006015 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
HOXA11-201ENST00000006015 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
HOXA11-201ENST00000006015 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
HOXA11-201ENST00000006015 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
HOXA11-201ENST00000006015 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
HOXA11-201ENST00000006015 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
HOXA11-201ENST00000006015 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
HOXA11-201ENST00000006015 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
HOXA11-201ENST00000006015 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
HOXA11-201ENST00000006015 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
HOXA11-201ENST00000006015 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
HOXA11-201ENST00000006015 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
HOXA11-201ENST00000006015 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
HOXA11-201ENST00000006015 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
HOXA11-201ENST00000006015 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
HOXA11-201ENST00000006015 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
HOXA11-201ENST00000006015 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
HOXA11-201ENST00000006015 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
HOXA11-201ENST00000006015 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
HOXA11-201ENST00000006015 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
HOXA11-201ENST00000006015 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
HOXA11-201ENST00000006015 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
HOXA11-201ENST00000006015 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
HOXA11-201ENST00000006015 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
HOXA11-201ENST00000006015 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
HOXA11-201ENST00000006015 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
HOXA11-201ENST00000006015 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
HOXA11-201ENST00000006015 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
HOXA11-201ENST00000006015 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
HOXA11-201ENST00000006015 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms