RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Obsl1D3YYU8 1804 aaKnown RBP12.34□□□□□ -0.43
Pcdha9-201ENSMUST00000115659 Smim26Q3V460 107 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Foxi1Q922I5 372 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 ApomQ9Z1R3 190 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Prr3Q811B5 190 aaKnown RBP12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Rnf183Q8QZS5 190 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Rspo3Q2TJ95 277 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm10604Q3V0X7 143 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Eml5Q8BQM8 1977 aa12.33□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Q08AU9 97 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm20499D3Z4G5 72 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm7102J3QQ10 178 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 CtsgP28293 261 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Olfr312Q7TRZ9 308 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Tmem52Q9D702 196 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Trav6n-6A0A075B6B2 114 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Ifitm1Q9D103 106 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Cysrt1Q9D1E4 142 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 CrygbP04344 175 aa12.32□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Socs3O35718 225 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 P01793 123 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Cela2aP05208 271 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Fam216aQ9DB54 251 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Igkv4-62A0A0G2JDW9 117 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Vwc2lQ505H4 222 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 MrapQ9D159 127 aa12.31□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Prok1Q14A28 105 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm9970F6ZED4 185 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 P01786 117 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Tmem131O70472 1877 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Lamtor3O88653 124 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 9930022D16RikQ8BG27 128 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm26558Q8BLW8 286 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Kif26aQ52KG5 1881 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Igkv8-24A0A140T8P5 121 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 P04942 107 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Ncor2Q9WU42 2472 aaKnown RBP12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Wfdc11A2A5H7 82 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Edn1P22387 202 aa12.3□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Igkv3-1A0A075B5P1 119 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Shisal2aA2A9G7 189 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Ccl25O35903 144 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm11733Q8BQP1 125 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Col6a6Q8C6K9 2265 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Defb26Q30KN7 186 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Rasl10aQ8K5A4 203 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Trav6-6A0A075B603 114 aa12.29□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Ighv1-64A0A075B5X3 117 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Trav12d-3A0A075B6A4 115 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Dazap2Q9DCP9 168 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Pcnx1Q9QYC1 2344 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Nlrc5C3VPR6 1915 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 P01738 130 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Igll1P20764 209 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Atp6v0bQ91V37 205 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm10638F6QEG2 257 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Lage3Q9CR70 148 aa12.28□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Ighv1-74A0A0G2JGK2 117 aa12.27□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Spry4Q9WTP2 300 aa12.27□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Jmjd1cQ69ZK6 2350 aa12.27□□□□□ -0.44
Pcdha9-201ENSMUST00000115659 Gm815Q3UWS2 115 aa12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ang5Q5GAN1 145 aa12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Mustn1Q99JI1 82 aa12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ca1P13634 261 aa12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Sptan1P16546 2472 aaKnown RBP12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Shisa9Q9CZN4 424 aa12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ss18l2Q9D174 77 aa12.27□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Olfr313Q5NC55 308 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 MsmbO08540 113 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 4933414I15RikQ9D4D5 133 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 BC048502Q80Y74 154 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Leap2Q91V13 76 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Igkv4-57-1A0A075B5M4 119 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Synj2bpQ9D6K5 145 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Myo7bQ99MZ6 2113 aa12.26□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Igkv3-2A0A075B5P0 119 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Igkv4-81A0A0G2JEY5 119 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ighv1-58A0A075B5W9 117 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 A530064D06RikQ8BNV8 229 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Igkv4-53A0A0G2JFC6 119 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Gm37988J3QM41 62 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Cox17P56394 63 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Zc2hc1aQ8BJH1 324 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Igkv3-9A0A140T8P4 119 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Gm9747Q810H1 104 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Mpv17l2Q8VIK2 200 aa12.25□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ighv8-4A0A0A6YW26 117 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 P01896 185 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Il22ra2Q80XF5 230 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Vwa8Q8CC88 1905 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Adamts9E9PUN6 1931 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Trav3-4A0A075B654 114 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Morn5Q9DAI9 170 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Lect2O88803 151 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 PpbpQ9EQI5 113 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 P01791 123 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ighv8-8A0A0A6YXQ0 119 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ighv1-62-2A0A0A6YXZ4 119 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 A0A286YE02 88 aa12.24□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Erdr1J3QMM0 206 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms