RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 P01680 129 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 SetxA2AKX3 2646 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Igkv4-53A0A0G2JFC6 119 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 GrnP28798 589 aaKnown RBP5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 SeboxP70368 190 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Fhl4Q8CDC8 279 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 RhohQ9D3G9 191 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Pcdh15Q99PJ1 1943 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Col4a5Q63ZW6 1691 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm45213A0A0U1RNZ6 101 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm15080A2BI02 449 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Tex26Q0VB26 296 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Rnf183Q8QZS5 190 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Igkv4-68A0A0B4J1I7 117 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm16381A0A1Y7VKT9 73 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Atg2aQ6P4T0 1914 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Trbv3A0A0A6YYE2 117 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 P01792 123 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 P0C1Z5 52 aa5.41□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Igkv5-37A0A140T8N4 115 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm2174F6ZVF2 133 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Prok1Q14A28 105 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Klk4Q9Z0M1 255 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Supt4h1bQ9Z199 117 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Cela2aP05208 271 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ypel3P61237 119 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm9747Q810H1 104 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Vwc2lQ505H4 222 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Trav6d-7A0A075B6B0 112 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 KprpB2RUR4 657 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 BC035044E0CXF8 138 aa5.4□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ighv8-4A0A0A6YW26 117 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Inafm1E9PV59 130 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gata4Q08369 441 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Prdm6Q3UZD5 596 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Ube2e1P52482 193 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 9430097D07RikQ8BS47 195 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Card19Q9D1I2 183 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Shisal2aA2A9G7 189 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Pfn1P62962 140 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 P01649 108 aa5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Taf15Q8BQ46 557 aaKnown RBP5.4□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Foxl2O88470 375 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Tpsab1Q02844 273 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 9130213A22RikQ3V3T2 120 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 F930015N05RikQ8C3A3 210 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 A730015C16RikQ8C992 119 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Atp6v0bQ91V37 205 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 VsirQ9D659 308 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Tcl1b4P56844 120 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Lmo1Q924W9 156 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Nit2Q9JHW2 276 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Ighv1-39A0A075B5V5 117 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gm33815A0A087WNV3 176 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 P01789 122 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Rnf138Q9CQE0 245 aaKnown RBP5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 GlrxQ9QUH0 107 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gm10192Q3V0S1 108 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Minos1Q7TNS2 76 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Id3P41133 119 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Mapk1ip1lQ8BH93 242 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Fam216aQ9DB54 251 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Igkv6-15A0A140T8M5 115 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Eid2bE9Q2Y0 151 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Ly86O88188 162 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Edn3P48299 214 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Prok2Q9QXU7 128 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 A0A286YE02 88 aa5.39□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Ighv1-16A0A075B5U1 98 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Pear1Q8VIK5 1034 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gemin7Q9CWY4 129 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Lyg1Q9D7Q0 197 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Dennd4cA6H8H2 1906 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Notch1Q01705 2531 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Obsl1D3YYU8 1804 aaKnown RBP5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 CrygbP04344 175 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 AmelxP63277 210 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Shisa9Q9CZN4 424 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Tpsg1Q9QUL7 311 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Trav3-4A0A075B654 114 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Mbd6Q3TY92 1003 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gm12253Q5NC48 229 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Dpm3Q9D1Q4 92 aa5.38□□□□□ -1.55
Scn8a-205ENSMUST00000108910 E130218I03RikA0A0U1RNU5 63 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Cd33Q63994 403 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Znf740Q6NZQ6 180 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Igkv4-59A0A0B4J1I8 117 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Igkv4-61A0A0G2JH00 117 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 TdhQ8K3F7 373 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Chchd5Q9CQP3 110 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gm20379A0A087WR34 119 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gm28778A0A087WSK7 233 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Ighv8-2A0A0A6YW58 119 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Igkv12-89A0A0G2JGW8 112 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Igkv3-9A0A140T8P4 119 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Tnfrsf26P83626 204 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Gm12169F2Z474 250 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Wipf2Q6PEV3 440 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Plxna4Q80UG2 1893 aa5.37□□□□□ -1.55
Scn8a-205ENSMUST00000108910 Ube2wQ8VDW4 151 aa5.37□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms