RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Gm20517G3UVU6 152 aa13.77□□□□□ -0.21
Usp48-201ENSMUST00000055131 Dad1P61804 113 aa13.77□□□□□ -0.21
Usp48-201ENSMUST00000055131 A930003A15RikQ3U552 87 aa13.77□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ube2wQ8VDW4 151 aa13.77□□□□□ -0.21
Usp48-201ENSMUST00000055131 PpbpQ9EQI5 113 aa13.77□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ighv1-19A0A0A6YWX0 117 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ca1P13634 261 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 CtsgP28293 261 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gatd1Q8BFQ8 220 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Atg2aQ6P4T0 1914 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Qrich2A0A140LIY9 2337 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Sptbn1Q62261 2363 aaKnown RBP13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gm9970F6ZED4 185 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 C730034F03RikQ8BGL5 111 aa13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ndufa4Q62425 82 aaKnown RBP13.76□□□□□ -0.21
Usp48-201ENSMUST00000055131 Trav14-3A0A075B607 120 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Zic4Q61467 341 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Tmem263Q9DAM7 115 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Rnf114Q9ET26 229 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Col6a6Q8C6K9 2265 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Igkv4-72A0A0B4J1I4 117 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Zcwpw2Q08EN7 125 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Tcf24V9GWT9 166 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Trav14d-3-dv8A0A075B619 120 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Trav14-2A0A075B694 121 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Erdr1J3QMM0 206 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Reg3gO09049 174 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 Lhfpl1Q80SV1 220 aa13.75□□□□□ -0.21
Usp48-201ENSMUST00000055131 P01791 123 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gm9961Q8BNV2 113 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Q8C708 225 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Spag11Q8K4N2 71 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 HampQ9EQ21 83 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Igkv8-16A0A0G2JDG9 121 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Tmem210Q9D2F0 147 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gm15294V9GXA7 121 aa13.74□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gm10604Q3V0X7 143 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Fam216bQ8CC14 138 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Igkv4-54A0A0G2JES9 117 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Igkv4-81A0A0G2JEY5 119 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gm5129F6YHA9 99 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Klhdc3Q8VEM9 382 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 MplkipQ9D011 178 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ighv6-7A0A0A6YWU3 119 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Wisp3D3Z5L9 354 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Slc25a48Q8BW66 306 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 4933414I15RikQ9D4D5 133 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Tnfrsf13bQ9ET35 249 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Lgals4Q8K419 326 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Fstl3Q9EQC7 256 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ighv5-9-1A0A0A6YVS4 126 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Prp2P05143 317 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Zfp36l1P23950 338 aa13.73□□□□□ -0.21
Usp48-201ENSMUST00000055131 Gm5294J3QP53 216 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Pygo2Q80V76 405 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Cysrt1Q9D1E4 142 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Rpl32-psP17932 135 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Xcl1P47993 114 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Samd5Q3V1H9 173 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ndufa3Q9CQ91 84 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Them7Q9DCP4 223 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 4930447F04RikA2AFR2 126 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Socs3O35718 225 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 A530064D06RikQ8BNV8 229 aa13.72□□□□□ -0.21
Usp48-201ENSMUST00000055131 Zc2hc1aQ8BJH1 324 aa13.71□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ighv1-74A0A0G2JGK2 117 aa13.71□□□□□ -0.21
Usp48-201ENSMUST00000055131 Ighv3-6P18531 116 aa13.71□□□□□ -0.21
Usp48-201ENSMUST00000055131 Lect2O88803 151 aa13.71□□□□□ -0.21
Usp48-201ENSMUST00000055131 Olfr312Q7TRZ9 308 aa13.71□□□□□ -0.21
Usp48-201ENSMUST00000055131 Igkv2-137A0A0B4J1H6 120 aa13.71□□□□□ -0.22
Usp48-201ENSMUST00000055131 Igkv8-34A0A0G2JDU0 121 aa13.71□□□□□ -0.22
Usp48-201ENSMUST00000055131 P01794 123 aa13.71□□□□□ -0.22
Usp48-201ENSMUST00000055131 Foxi1Q922I5 372 aa13.71□□□□□ -0.22
Usp48-201ENSMUST00000055131 Dock9Q8BIK4 2055 aa13.71□□□□□ -0.22
Usp48-201ENSMUST00000055131 Q08AU9 97 aa13.7□□□□□ -0.22
Usp48-201ENSMUST00000055131 Myo9bQ9QY06 2114 aa13.7□□□□□ -0.22
Usp48-201ENSMUST00000055131 Ighv1-4A0A075B5T4 117 aa13.7□□□□□ -0.22
Usp48-201ENSMUST00000055131 NpbQ8K4P1 119 aa13.7□□□□□ -0.22
Usp48-201ENSMUST00000055131 Ncor2Q9WU42 2472 aaKnown RBP13.7□□□□□ -0.22
Usp48-201ENSMUST00000055131 Trav14d-1A0A075B6B1 121 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Ighv1-23A0A0A6YVW3 117 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Edn1P22387 202 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Plxna4Q80UG2 1893 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Trav9d-4A0A0G2JG37 103 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Ighv1-64A0A075B5X3 117 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Runx1Q03347 451 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Smim26Q3V460 107 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Ighv8-8A0A0A6YXQ0 119 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 LoxP28301 411 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Tln2Q71LX4 2375 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Igkv4-69A0A0B4J1I6 116 aa13.69□□□□□ -0.22
Usp48-201ENSMUST00000055131 Defa27F2Z403 93 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Gm11733Q8BQP1 125 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Tomm6Q9CQN3 74 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Igkv4-79A0A075B5L8 119 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 CtsbP10605 339 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Kif26aQ52KG5 1881 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Gm37988J3QM41 62 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Cd300eQ8K249 196 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Spink12Q9D256 87 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms